RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Iqca1Q9CUL5 857 aa7.79□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Cd2bp2Q9CWK3 342 aaKnown RBP7.79□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Elovl1Q9JLJ5 279 aa7.79□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Usp31E9Q6Y8 1344 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Gm7792A0A0J9YU01 481 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Ankrd60A2AMD2 318 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Gm3183D3YUJ6 481 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Vmn2r27D3YUK6 857 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Gm7233E9PZI8 198 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Gm9732F6QVC4 198 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Gm5798F7BTS7 198 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Gm3139J3QK78 481 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Gm16427J3QN52 483 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Gm3106J3QPH3 481 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Gm8011K7N6Y5 207 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Gm8104K7N744 198 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Foxm1O08696 760 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Dctn1O08788 1281 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Lmnb1P14733 588 aaKnown RBP7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Hspb7P35385 169 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 S100bP50114 92 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Arl4cP61208 192 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Traf5P70191 558 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Smarca1Q6PGB8 1046 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 4930451G09RikQ8C5G4 195 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Dmrta1Q8CFG4 490 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Med25Q8VCB2 745 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Pcdha3Q91Y16 942 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Trim34aQ99PP6 485 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Acsl3Q9CZW4 720 aaKnown RBP7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Ovca2Q9D7E3 225 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Scamp5Q9JKD3 235 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Hey2Q9QUS4 339 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Gabbr1Q9WV18 960 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Flt4P35917 1363 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Greb1lB9EJV3 1913 aa7.78□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Mical3Q8CJ19 1993 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Kank1E9Q238 1360 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Pabpc1lA2A5N3 607 aaKnown RBP7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Tyw5A2RSX7 315 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 B1ARW8 110 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Tbc1d2B1AVH7 922 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Npy5rO70342 466 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Cacng1O70578 223 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Zp3P10761 424 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Fkbp1aP26883 108 aaKnown RBP7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Ptpn22P29352 802 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Id4P41139 161 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Mmp9P41245 730 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Ccndbp1Q3TVC7 356 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 ArsgQ3TYD4 525 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Mapkapk3Q3UMW7 384 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Gpr162Q3UN16 588 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Ksr2Q3UVC0 959 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Tgfb1i1Q62219 461 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 BegainQ68EF6 600 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Pced1aQ6P1Z5 449 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Zbtb40Q6PCS8 1258 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Olfr1472Q7TQQ9 314 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Zbtb41Q811F1 908 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Pknox2Q8BG99 474 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Frmd4aQ8BIE6 1020 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Rd3Q8BRE0 195 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Rspry1Q8BVR6 576 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Mbnl2Q8C181 373 aaKnown RBP7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Klf11Q8K1S5 502 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 FktnQ8R507 461 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Ccdc9Q8VC31 543 aaKnown RBP7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Chchd4Q8VEA4 139 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Clec2dQ91V08 207 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Fig4Q91WF7 907 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Kti12Q9D1R2 351 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Ap2b1Q9DBG3 937 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 PerpQ9JK95 193 aa7.77□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Megf6Q80V70 1572 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 A0A1Y7VJ07 166 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Mroh9G5E8L9 891 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 P01675 107 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Hspa2P17156 633 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Pbx1P41778 430 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Ccdc174Q3U155 467 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Fam92bQ3V2J0 292 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Pla2g4eQ50L42 875 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Zbtb17Q60821 794 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Dvl3Q61062 716 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Doc2aQ7TNF0 405 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Pnma8aQ80VM8 430 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Klhdc1Q80YG3 406 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Rap2aQ80ZJ1 183 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 UnkQ8BL48 810 aaKnown RBP7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 A130051J06RikQ8CAU1 227 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Fam160b1Q8CDM8 764 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Ciapin1Q8WTY4 309 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Mpped1Q91ZG2 326 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Nipsnap3bQ9CQE1 247 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Cuedc2Q9CXX9 284 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Dbndd1Q9CZ00 160 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Tssc4Q9JHE7 317 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Zfp831A2ADM8 1628 aa7.76□□□□□ -1.17
Ccdc54-201ENSMUST00000062439 Btaf1E9QAE3 1848 aa7.75□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms