RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Ero1bQ8R2E9 467 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Map4k3Q99JP0 894 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Rnaseh2aQ9CWY8 301 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Ndc80Q9D0F1 642 aaKnown RBP12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 MkksQ9JI70 570 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Trpc2Q9R244 1172 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Ambra1A2AH22 1300 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Zbed6D2EAC2 980 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Itga4Q00651 1039 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Trpm4Q7TN37 1213 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Robo4Q8C310 1012 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Vmn1r213Q8R278 384 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Sh3kbp1Q8R550 709 aaKnown RBP12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Q9CQC3 228 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Ccdc130Q9D516 385 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Tmem86aQ9D8N3 241 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Pidd1Q9ERV7 915 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Usp21Q9QZL6 566 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Smim10l2aA0A0B4J1F8 78 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Fam171a2A2A699 822 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 LgmnO89017 435 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Gm8773Q3UQ24 132 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Pcnx4Q3UVY5 1174 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Syce1lQ5D525 247 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Grik4Q8BMF5 956 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Fndc3aQ8BX90 1198 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Dis3lQ8C0S1 1053 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Sept11Q8C1B7 431 aaKnown RBP12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Olfr784Q8VFZ9 319 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Echdc3Q9D7J9 300 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 PolkQ9QUG2 852 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Tatdn2B7ZNL9 783 aaKnown RBP12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Rpl5P47962 297 aaKnown RBP12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 MafbP54841 323 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 NcstnP57716 708 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 P3h1Q3V1T4 739 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Nfe2l2Q60795 597 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Nup93Q8BJ71 819 aaKnown RBP12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Rftn2Q8CHX7 500 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Tbc1d13Q8R3D1 400 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 PudpQ9D5U5 234 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 B4galt5Q9JMK0 388 aa12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Tnrc6cQ3UHC0 1690 aaKnown RBP12.67□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Plekhg4A0A1L1SU27 1217 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 OmdO35103 423 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Man1a1P45700 655 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Srek1ip1Q4V9W2 153 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Ahcyl1Q80SW1 530 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 TfgQ9Z1A1 397 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Gm28168A0A087WNP1 180 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Osbpl8B9EJ86 889 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Adgrf2E9Q4J9 644 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Sptlc1O35704 473 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Mmp10O55123 476 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 LipeP54310 759 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Ccdc85aQ5SP85 500 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Sh3rf1Q69ZI1 892 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Casc4Q6P2L7 435 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Tdpoz3Q717B4 365 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Fam107aQ78TU8 144 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 ChfrQ810L3 664 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Entpd3Q8BFW6 529 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 VcpkmtQ8C436 228 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Adam32Q8K410 754 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Rbmx2Q8R0F5 326 aaKnown RBP12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Rxfp2Q91ZZ5 737 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Taf1dQ9D4V4 322 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Q9D9D9 101 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Pik3cgQ9JHG7 1102 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Slfn2Q9Z0I6 378 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 4931406B18RikA2RSL7 367 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Slc2a4P14142 509 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Ass1P16460 412 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Cdc14aQ6GQT0 603 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 RfflQ6ZQM0 377 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Fbxw8Q8BIA4 598 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Palm2Q8BR92 376 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Hsdl1Q8BTX9 330 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Slc9a4Q8BUE1 797 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Il31raQ8K5B1 716 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 ArhgdiaQ99PT1 204 aaKnown RBP12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Ino80bQ99PT3 375 aaKnown RBP12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Nipsnap3bQ9CQE1 247 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Pold3Q9EQ28 462 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Myh8P13542 1937 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Vmn2r59E9PUT5 865 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 F830016B08RikG3UWE2 416 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Rdh7O88451 316 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Hsd17b7O88736 334 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Il2rbP16297 539 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Lrrn4P59383 733 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Kcna2P63141 499 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Psmb4P99026 264 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Wscd1Q80XH4 572 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Wasf2Q8BH43 497 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 AgpsQ8C0I1 645 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Ddx18Q8K363 660 aaKnown RBP12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Smim11aQ99J19 55 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 NfkbizQ9EST8 728 aa12.66□□□□□ -0.38
Pdlim5-201ENSMUST00000029941 Gm6205E9PZS2 359 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms