RNA–Protein interactions for RNA: ENST00000641549.1

PTPRVP-205, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

BASIC

Gene PTPRVP, Length 5,067 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-205ENST00000641549 APPL1Q9UKG1 709 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 ANKRD6Q9Y2G4 727 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 PIK3C2AO00443 1686 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 RNF103O00237 685 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 TBC1D4O60343 1298 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 BMP6P22004 513 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 KCNMA1Q12791 1236 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 MAMLD1Q13495 774 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 KIAA0319LQ8IZA0 1049 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 CLEC4FQ8N1N0 589 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 DTX3LQ8TDB6 740 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 MFSD14AQ96MC6 490 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 STN1Q9H668 368 aaKnown RBP13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 TRIM17Q9Y577 477 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 ZSCAN9O15535 394 aaPredicted RBP13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 ATP9AO75110 1047 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 PECAM1P16284 738 aaPredicted RBP13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 HSPA13P48723 471 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 EIF2B5Q13144 721 aaKnown RBP13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 TP53BP2Q13625 1128 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 PARP6Q2NL67 630 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 KCNT2Q6UVM3 1135 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 LRRC49Q8IUZ0 686 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 ZCCHC9Q8N567 271 aaKnown RBP13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 GLIS3Q8NEA6 775 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 PPTC7Q8NI37 304 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 ECSITQ9BQ95 431 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 SIGLEC1Q9BZZ2 1709 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 FAM153AQ9UHL3 310 aa13.8□□□□□ -0.2
PTPRVP-205ENST00000641549 RBAK-RBAKDNI3L0D1 243 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 CCDC130P13994 396 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 NOGQ13253 232 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 ACBD5Q5T8D3 534 aaPredicted RBP13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 CELF6Q96J87 481 aaKnown RBP13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 SIKE1Q9BRV8 207 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 ASTN2O75129 1339 aaPredicted RBP13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 PLIN4Q96Q06 1357 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 BDNFP23560 247 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 KLRC2P26717 231 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 RAP1GDS1P52306 607 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 HPCAP84074 193 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 SP3Q02447 781 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 FLOT2Q14254 428 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 TRIP10Q15642 601 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 CXCL17Q6UXB2 119 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 TRIM48Q8IWZ4 208 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 CCDC33Q8N5R6 958 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 ANKRD52Q8NB46 1076 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 PGM2Q96G03 612 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 SRPK1Q96SB4 655 aaKnown RBP13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 BATF3Q9NR55 127 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 SPASTQ9UBP0 616 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 DNPEPQ9ULA0 475 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 GIT1Q9Y2X7 761 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 PTCH2Q9Y6C5 1203 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 NFICP08651 508 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 POLNQ7Z5Q5 900 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 ANKRD23Q86SG2 305 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 DNAAF5Q86Y56 855 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 BAP1Q92560 729 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 SPATA17Q96L03 361 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 SEPT3Q9UH03 358 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 LNPEPQ9UIQ6 1025 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 NID2Q14112 1375 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 RASSF10A6NK89 507 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 ATP5BP06576 529 aaKnown RBP13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 SCNN1GP51170 649 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 OVGP1Q12889 678 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 ITGB3BPQ13352 177 aaPredicted RBP13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 CAMK2GQ13555 558 aaPredicted RBP13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 ABHD15Q6UXT9 468 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 KCNMB4Q86W47 210 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 TKTL2Q9H0I9 626 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 CTNNAL1Q9UBT7 734 aa13.79□□□□□ -0.2
PTPRVP-205ENST00000641549 OPLAHO14841 1288 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 FARP2O94887 1054 aaPredicted RBP13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 TSHRP16473 764 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 TNFRSF8P28908 595 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 ERAP2Q6P179 960 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 AENQ8WTP8 325 aaKnown RBP13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 CIPCQ9C0C6 399 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 TMEM161AQ9NX61 479 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 DNAJC16Q9Y2G8 782 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 SPACA6W5XKT8 324 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 F8VP50 259 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 CHADO15335 359 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 IGSF6O95976 241 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 ZNF7P17097 686 aaPredicted RBP13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 CALB2P22676 271 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 NUDT2P50583 147 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 CDK7P50613 346 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 LRRC74AQ0VAA2 488 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 DPYSL3Q14195 570 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 FAM110CQ1W6H9 321 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 DUSP28Q4G0W2 176 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 SLC45A4Q5BKX6 768 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 KAT5Q92993 513 aa13.78□□□□□ -0.2
PTPRVP-205ENST00000641549 ZCCHC2Q9C0B9 1178 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms