RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 TRIM68Q6AZZ1 485 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 MAB21L3Q8N8X9 362 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 NOA1Q8NC60 698 aaKnown RBP12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 SPATA4Q8NEY3 305 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 OR6B3Q8NGW1 331 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 SPPL2BQ8TCT7 592 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 ACTRT1Q8TDG2 376 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 C2orf15Q8WU43 125 aaKnown RBP12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 MS4A14Q96JA4 679 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 BTBD6Q96KE9 485 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 PKMYT1Q99640 499 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 MRPL45Q9BRJ2 306 aaKnown RBP12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 CARD9Q9H257 536 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 SNX25Q9H3E2 840 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 EBF3Q9H4W6 596 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 ABI2Q9NYB9 513 aaPredicted RBP12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 EHD2Q9NZN4 543 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 CHORDC1Q9UHD1 332 aaPredicted RBP12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 CCDC66A2RUB6 948 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 M0QYV0 167 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 PGRMC1O00264 195 aaKnown RBP12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 O00370 1275 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 TM4SF5O14894 197 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 HUS1O60921 280 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 RHOXF2BP0C7M4 288 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 SMARCB1Q12824 385 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 MAMLD1Q13495 774 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 RUNX3Q13761 415 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 SF3A2Q15428 464 aaKnown RBP12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 CCDC6Q16204 474 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 CCDC142Q17RM4 750 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 C2CD6Q53TS8 623 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 SDHAF4Q5VUM1 108 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 TXNDC8Q6A555 127 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 DNAJC24Q6P3W2 148 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 LCLAT1Q6UWP7 414 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 CEP68Q76N32 757 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 DPH6Q7L8W6 267 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 PHLDB2Q86SQ0 1253 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 KBTBD6Q86V97 674 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 METTL23Q86XA0 190 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 THEM5Q8N1Q8 247 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 RASGEF1CQ8N431 466 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 WDTC1Q8N5D0 677 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 TOP6BLQ8N6T0 577 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 GAB3Q8WWW8 586 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 EZH1Q92800 747 aaPredicted RBP12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 GCNAQ96QF7 691 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 RHOXF2Q9BQY4 288 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 ANKZF1Q9H8Y5 726 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 THG1LQ9NWX6 298 aaKnown RBP12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 WDR35Q9P2L0 1181 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 CFAP47Q6ZTR5 3102 aa12.42□□□□□ -0.42
ERGIC3-220ENST00000640748 CCDC163A0A0D9SF12 145 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 A8MXQ7 604 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 AXIN1O15169 862 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 PROSCO94903 275 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 EGFP01133 1207 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 SETSIPP0DME0 302 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 H2AFXP16104 143 aaPredicted RBP12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 MCM3P25205 808 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 LAMA1P25391 3075 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 CTNNA1P35221 906 aaKnown RBP12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 GNL1P36915 607 aaPredicted RBP12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 LIMK1P53667 647 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 GSCP56915 257 aaPredicted RBP12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 ZNF268Q14587 947 aaPredicted RBP12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 SOWAHAQ2M3V2 549 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 SEL1L2Q5TEA6 688 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 LIMS2Q7Z4I7 341 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 MTERF4Q7Z6M4 381 aaKnown RBP12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 MON1AQ86VX9 555 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 PDCL2Q8N4E4 241 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 CD101Q93033 1021 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 C18orf8Q96DM3 657 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 SLC22A12Q96S37 553 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 NAP1L3Q99457 506 aaPredicted RBP12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 PARD6BQ9BYG5 372 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 MIS12Q9H081 205 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 ARRDC1-AS1Q9H2J1 176 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 TDP1Q9NUW8 608 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 SMARCAL1Q9NZC9 954 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 IP6K2Q9UHH9 426 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 ZMYM5Q9UJ78 669 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 TTC7AQ9ULT0 858 aaPredicted RBP12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 L1RE1Q9UN81 338 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 PCDHB5Q9Y5E4 795 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 PCDHA3Q9Y5H8 950 aa12.41□□□□□ -0.42
ERGIC3-220ENST00000640748 OBSL1O75147 1896 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 TCRBV5S1A1TA0A578 114 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 TARSL2A2RTX5 802 aaKnown RBP12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 CCDC188H7C350 402 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 HCRTO43612 131 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 RPP40O75818 363 aaKnown RBP12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 EPN2O95208 641 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 ZNF806P0C7X5 589 aa12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 WARSP23381 471 aaKnown RBP12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 ACAT1P24752 427 aaKnown RBP12.4□□□□□ -0.42
ERGIC3-220ENST00000640748 DDX6P26196 483 aaKnown RBP eCLIP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms