RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 CAPRIN2Q6IMN6 1127 aaKnown RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 HEATR3Q7Z4Q2 680 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 DPP9Q86TI2 863 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 DCP1BQ8IZD4 617 aaKnown RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 SNX19Q92543 992 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 PTCD3Q96EY7 689 aaKnown RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 C8orf48Q96LL4 319 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 CGRRF1Q99675 332 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 MOV10Q9HCE1 1003 aaKnown RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 MAN1C1Q9NR34 630 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 ZNF701Q9NV72 531 aaPredicted RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 LRIT1Q9P2V4 623 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 TSPAN16Q9UKR8 245 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 LZTS1Q9Y250 596 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 R3HCC1Q9Y3T6 440 aaKnown RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 CACNA1BQ00975 2339 aa0.28□□□□□ -2.37
CCDC7-215ENST00000639629 LTBP1Q14766 1721 aa0.28□□□□□ -2.37
CCDC7-215ENST00000639629 GOLGA8AA7E2F4 631 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 GOLGA8BA8MQT2 603 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 PYCARD-AS1I3L0S3 204 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 DVL1O14640 695 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 PCDH17O14917 1159 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 PLAUP00749 431 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 FAM157CP0CG43 387 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 TRIM27P14373 513 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 IL1R2P27930 398 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 TTKP33981 857 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 RBM6P78332 1123 aaKnown RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 CRHR2Q13324 411 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ARL6IP4Q66PJ3 421 aaKnown RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ZDHHC24Q6UX98 284 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 C16orf82Q7Z2V1 217 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 MDGA2Q7Z553 956 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 MARCH9Q86YJ5 346 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ABCF1Q8NE71 845 aaKnown RBP eCLIP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 DNASE2BQ8WZ79 361 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 LGALS12Q96DT0 336 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ZNF479Q96JC4 524 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 RBM4Q9BWF3 364 aaKnown RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 LCE3DQ9BYE3 92 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 QRSL1Q9H0R6 528 aaKnown RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 MAGIXQ9H6Y5 334 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 XPO5Q9HAV4 1204 aaKnown RBP eCLIP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 FBRSL1Q9HCM7 1045 aaKnown RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 MTMR10Q9NXD2 777 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 CPA4Q9UI42 421 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ZBTB21Q9ULJ3 1066 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 PKP3Q9Y446 797 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 A0A087X002 238 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 EPM2AB3EWF7 344 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 EBAG9O00559 213 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 USP1O94782 785 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 NADKO95544 446 aaPredicted RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ALDH2P05091 517 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 MYCLP1P12525 358 aaPredicted RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 CD6P30203 668 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 RYKP34925 604 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 CDKN1AP38936 164 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 HNRNPA3P51991 378 aaKnown RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 FAM193AP78312 1265 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 MXRA7P84157 204 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 GAB1Q13480 694 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ABLIM2Q6H8Q1 611 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 FJX1Q86VR8 437 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 NRROSQ86YC3 692 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 SPATA2LQ8IUW3 424 aaPredicted RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 HERC6Q8IVU3 1022 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 SDR16C5Q8N3Y7 309 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ZNF843Q8N446 348 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 OR4N2Q8NGD1 307 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ZBTB9Q96C00 473 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 TM2D2Q9BX73 214 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 VPS16Q9H269 839 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 TASP1Q9H6P5 420 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 PIH1D1Q9NWS0 290 aaKnown RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 TESQ9UGI8 421 aaKnown RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 AMFRQ9UKV5 643 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 IGLV5-39A0A0G2JS06 123 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 UNC119BA6NIH7 251 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 SMTNL1A8MU46 457 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 KIF1CO43896 1103 aaKnown RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 KPNA6O60684 536 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ALPLP05186 524 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 TFEBP19484 476 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ACVR2AP27037 513 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 GTF2F1P35269 517 aaKnown RBP eCLIP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 AMTP48728 403 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ZNF543Q08ER8 600 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 DAG1Q14118 895 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ARHGEF7Q14155 803 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 INSCQ1MX18 579 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 KIF19Q2TAC6 998 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 Q4G0T1 1027 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 TRILQ7L0X0 811 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ZNF280BQ86YH2 543 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ERC1Q8IUD2 1116 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 SPPL3Q8TCT6 385 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 GLG1Q92896 1179 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 CDK5RAP3Q96JB5 506 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 PPP1R13BQ96KQ4 1090 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms