RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 RIPOR1Q6ZS17 1223 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 ZBTB46Q86UZ6 589 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 KLHL23Q8NBE8 558 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 TNIP2Q8NFZ5 429 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 COG5Q9UP83 839 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 NCKAP1Q9Y2A7 1128 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 DDX3XO00571 662 aaKnown RBP eCLIP17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 MAGEB2O15479 319 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 GRIN3BO60391 1043 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 TRADDQ15628 312 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 CDC73Q6P1J9 531 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 GAL3ST1Q99999 423 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 NLNQ9BYT8 704 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 SEMA6AQ9H2E6 1030 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 ANO9A1A5B4 782 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 PSMA4P25789 261 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 MAGEA9P43362 315 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 C21orf59P57076 290 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 ATP6AP1LQ52LC2 224 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 BTBD3Q9Y2F9 522 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 KDM6AO15550 1401 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 CHUKO15111 745 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 TALDO1P37837 337 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 RFC5P40937 340 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 INSCQ1MX18 579 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 METTL21CQ5VZV1 264 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 GLI2P10070 1586 aa17.4■□□□□ 0.38
CACNA1A-253ENST00000637927 ABHD14A-ACY1A0A1B0GW23 586 aa17.39■□□□□ 0.38
CACNA1A-253ENST00000637927 OR10H2O60403 315 aa17.39■□□□□ 0.38
CACNA1A-253ENST00000637927 PLK1P53350 603 aa17.39■□□□□ 0.38
CACNA1A-253ENST00000637927 RNF148Q8N7C7 305 aa17.39■□□□□ 0.38
CACNA1A-253ENST00000637927 PPP1R10Q96QC0 940 aaKnown RBP17.39■□□□□ 0.38
CACNA1A-253ENST00000637927 ARMC7Q9H6L4 198 aa17.39■□□□□ 0.38
CACNA1A-253ENST00000637927 ACADSBP45954 432 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 PTK6Q13882 451 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 NEDD8Q15843 81 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 CHPFQ8IZ52 775 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 AKT1S1Q96B36 256 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 MANSC1Q9H8J5 431 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 KLC4Q9NSK0 619 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 SNTG2Q9NY99 539 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 TRPM5Q9NZQ8 1165 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 SPRP35270 261 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 CYLC2Q14093 348 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 KCTD21Q4G0X4 260 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 LRRN4Q8WUT4 740 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 REXO5Q96IC2 774 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 TRIM17Q9Y577 477 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 CAMTA2O94983 1202 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 HOXA7P31268 230 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 POLD2P49005 469 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 ACAP2Q15057 778 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 EFHC1Q5JVL4 640 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 ZCCHC8Q6NZY4 707 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 OSMRQ99650 979 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 RBBP8Q99708 897 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 C7orf25Q9BPX7 421 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 ALAS2P22557 587 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 RPL4P36578 427 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 AGMOQ6ZNB7 445 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 RMND5AQ9H871 391 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 SYNPO2Q9UMS6 1093 aa17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 MORC2Q9Y6X9 1032 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-253ENST00000637927 ATXN2Q99700 1313 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 SLC25A12O75746 678 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 KCNH1O95259 989 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 MTAPQ13126 283 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 NR6A1Q15406 480 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 DENND1BQ6P3S1 775 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 SLC30A10Q6XR72 485 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 C7orf57Q8NEG2 295 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 SMPDL3BQ92485 455 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 DLGAP2Q9P1A6 1054 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 MDH1P40925 334 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 CTNNAL1Q9UBT7 734 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 ARHGEF40Q8TER5 1519 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 IGSF9BQ9UPX0 1349 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 HS6ST1O60243 411 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 ARP10275 920 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 ATP5F1P24539 256 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 GTF2A2P52657 109 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 PITRM1Q5JRX3 1037 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 ANKRD13AQ8IZ07 590 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 PRMT6Q96LA8 375 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 CRAMP1Q96RY5 1269 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 OSER1Q9NX31 292 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 NOS1APO75052 506 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 SRGNP10124 158 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 MAGEA10P43363 369 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 NDUFAF6Q330K2 333 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 PACS2Q86VP3 889 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 SETD4Q9NVD3 440 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 PAK5Q9P286 719 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 AP4E1Q9UPM8 1137 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 TMEM120BA0PK00 339 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 SEC13P55735 322 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 PDIA5Q14554 519 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 TERF2Q15554 542 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 ALX1Q15699 326 aa17.38■□□□□ 0.37
CACNA1A-253ENST00000637927 SLC30A9Q6PML9 568 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms