RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 IRS1P35568 1242 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 CAV1Q03135 178 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 TTC9BQ8N6N2 239 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 C3orf20Q8ND61 904 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 TLCD1Q96CP7 247 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 VCPIP1Q96JH7 1222 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 RIPOR3Q96MK2 946 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 CDK5RAP1Q96SZ6 601 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 TRIM7Q9C029 511 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 ZCWPW1Q9H0M4 648 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 YBX2Q9Y2T7 364 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 THSD7BQ9C0I4 1608 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 ANKRD65E5RJM6 399 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 TBC1D4O60343 1298 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 TRUB2O95900 331 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 ERBB2P04626 1255 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 RFC1P35251 1148 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 PLTPP55058 493 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 SMAD3P84022 425 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 CYP4F8P98187 520 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 RNF219Q5W0B1 726 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 SYDE1Q6ZW31 735 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 ST13P5Q8NFI4 369 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 PRM3Q9NNZ6 103 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 TMLHEQ9NVH6 421 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 SFMBT1Q9UHJ3 866 aa12.91□□□□□ -0.34
SYNGAP1-207ENST00000628646 SHBGP04278 402 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 CYP11A1P05108 521 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 MDH1P40925 334 aaKnown RBP12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 RPL21P46778 160 aaKnown RBP12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 CCT5P48643 541 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 PSEN1P49768 467 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 C15orf59Q2T9L4 293 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 TNFAIP8L3Q5GJ75 292 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 BCAS4Q8TDM0 211 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 DDI1Q8WTU0 396 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 SERPINB11Q96P15 392 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 FAM129AQ9BZQ8 928 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 DNMT3LQ9UJW3 386 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 NUDT17P0C025 328 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 HAPLN1P10915 354 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 CCDC89Q8N998 374 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 SMOQ99835 787 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 CLSTN3Q9BQT9 956 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 PCDHGC3Q9UN70 934 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 ZNF148Q9UQR1 794 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 FAM50BQ9Y247 325 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 H3BRJ5 948 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 RGS16O15492 202 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 TSPAN3O60637 253 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 NEFHP12036 1026 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 CCR1P32246 355 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 RAB33AQ14088 237 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 CBX2Q14781 532 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 FBXO25Q8TCJ0 367 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 RABEP2Q9H5N1 569 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 NAALADL1Q9UQQ1 740 aa12.9□□□□□ -0.34
SYNGAP1-207ENST00000628646 SRRM3A6NNA2 597 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 E7EVH7 732 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 H3BQ06 376 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 CYP1A1P04798 512 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 RARAP10276 462 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 EPHB2P29323 1055 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 NOS2P35228 1153 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 GPD2P43304 727 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 VPS41P49754 854 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 CENPCQ03188 943 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 BCL7CQ8WUZ0 217 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 RSAD2Q8WXG1 361 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 EPN3Q9H201 632 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 ADAM7Q9H2U9 754 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 AVENQ9NQS1 362 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 DONSONQ9NYP3 566 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 TJP3O95049 919 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 MMP8P22894 467 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 RPL7AP62424 266 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 SLC20A2Q08357 652 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 ZC3H12AQ5D1E8 599 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 ARL14EPQ8N8R7 260 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 SLCO2A1Q92959 643 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 GDF15Q99988 308 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 DDX56Q9NY93 547 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 CNTN6Q9UQ52 1028 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 IKBKGQ9Y6K9 419 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 HPDP32754 393 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 ERVK-21P61565 698 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 SNX1Q13596 522 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 TAF5Q15542 800 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 TCEAL5Q5H9L2 206 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 AGBL2Q5U5Z8 902 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 PHF13Q86YI8 300 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 SLC13A5Q86YT5 568 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 CLEC4CQ8WTT0 213 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 THG1LQ9NWX6 298 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 ASB3Q9Y575 518 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 HCFC2Q9Y5Z7 792 aa12.89□□□□□ -0.35
SYNGAP1-207ENST00000628646 F5H5T6 163 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 NDUFAB1O14561 156 aa12.88□□□□□ -0.35
SYNGAP1-207ENST00000628646 PTP4A2Q12974 167 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms