RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 MED10Q9BTT4 135 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 CHST7Q9NS84 486 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 BEST1O76090 585 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 ERBB2P04626 1255 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 FAM163BP0C2L3 166 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 SP100P23497 879 aaPredicted RBP11.98□□□□□ -0.49
ATRX-213ENST00000624032 PKDCCQ504Y2 493 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 SPDYAQ5MJ70 313 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 PMF1Q6P1K2 205 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 LRRC8CQ8TDW0 803 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 ZFAND2BQ8WV99 257 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 ATG4AQ8WYN0 398 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 MAML1Q92585 1016 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 PCED1BQ96HM7 432 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 VN1R3Q9BXE9 311 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 ZNF518BQ9C0D4 1074 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 EURLQ9NYK6 297 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 DLGAP2Q9P1A6 1054 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 UVRAGQ9P2Y5 699 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 DSEQ9UL01 958 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 CDH9Q9ULB4 789 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 CEP290O15078 2479 aa11.98□□□□□ -0.49
ATRX-213ENST00000624032 EDF1O60869 148 aaKnown RBP11.97□□□□□ -0.49
ATRX-213ENST00000624032 SPAG7O75391 227 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 GABBR2O75899 941 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 CBX6O95503 412 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 TYMPP19971 482 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 PTPN4P29074 926 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 VPS41P49754 854 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 RPS6KA3P51812 740 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 CACNA2D1P54289 1103 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 RTP2Q5QGT7 225 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 VARS2Q5ST30 1063 aaKnown RBP11.97□□□□□ -0.49
ATRX-213ENST00000624032 KCNT2Q6UVM3 1135 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 CFAP61Q8NHU2 1237 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 SPOCK2Q92563 424 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 C9orf72Q96LT7 481 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 PWWP2AQ96N64 755 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 ZBED2Q9BTP6 218 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 SLCO1B3Q9NPD5 702 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 TMEM30AQ9NV96 361 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 HESX1Q9UBX0 185 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 GOLGA8SH3BPF8 625 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 PCSK1P29120 753 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 VHLP40337 213 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 CCDC6Q16204 474 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 PRSS55Q6UWB4 352 aaPredicted RBP11.97□□□□□ -0.49
ATRX-213ENST00000624032 TRABD2AQ86V40 505 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 THEM5Q8N1Q8 247 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 BBOF1Q8ND07 529 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 MYLPFQ96A32 169 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 LBHD1Q9BQE6 289 aaPredicted RBP11.97□□□□□ -0.49
ATRX-213ENST00000624032 ACBD6Q9BR61 282 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 TLE6Q9H808 572 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 LRCH1Q9Y2L9 728 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 HNRNPCL1O60812 293 aaKnown RBP11.97□□□□□ -0.49
ATRX-213ENST00000624032 RTN3O95197 1032 aaPredicted RBP11.97□□□□□ -0.49
ATRX-213ENST00000624032 GJB5O95377 273 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 ARPP19P56211 112 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 C1QBPQ07021 282 aaKnown RBP11.97□□□□□ -0.49
ATRX-213ENST00000624032 PDK4Q16654 411 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 INTS6LQ5JSJ4 861 aaKnown RBP11.97□□□□□ -0.49
ATRX-213ENST00000624032 RELL1Q8IUW5 271 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 ANKRD52Q8NB46 1076 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 ATL2Q8NHH9 583 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 C10orf82Q8WW14 230 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 IGSF21Q96ID5 467 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 HNRNPABQ99729 332 aaKnown RBP11.97□□□□□ -0.49
ATRX-213ENST00000624032 DCLK3Q9C098 648 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 SYNCQ9H7C4 482 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 NMRK1Q9NWW6 199 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 SCOCQ9UIL1 159 aa11.97□□□□□ -0.49
ATRX-213ENST00000624032 LCHNA4D1U4 455 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 E5RJQ4 531 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 PRPF4O43172 522 aaKnown RBP eCLIP11.96□□□□□ -0.49
ATRX-213ENST00000624032 MAP3K13O43283 966 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 ABHD2P08910 425 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 FGFR3P22607 806 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 SLC18A1P54219 525 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 SLC45A4Q5BKX6 768 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 C9orf50Q5SZB4 431 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 PSRC1Q6PGN9 363 aaPredicted RBP11.96□□□□□ -0.49
ATRX-213ENST00000624032 RSPO2Q6UXX9 243 aaPredicted RBP11.96□□□□□ -0.49
ATRX-213ENST00000624032 CEP128Q6ZU80 1094 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 CMTR2Q8IYT2 770 aaKnown RBP11.96□□□□□ -0.49
ATRX-213ENST00000624032 DENND1AQ8TEH3 1009 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 SLC35F5Q8WV83 523 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 FAM136AQ96C01 138 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 KCNK16Q96T55 309 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 PKMYT1Q99640 499 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 PIDD1Q9HB75 910 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 SAR1AQ9NR31 198 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 KRT82Q9NSB4 513 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 WDR35Q9P2L0 1181 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 LNPEPQ9UIQ6 1025 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 ZFP69BQ9UJL9 534 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 SLC4A7Q9Y6M7 1214 aa11.96□□□□□ -0.49
ATRX-213ENST00000624032 SF3B1O75533 1304 aaKnown RBP eCLIP11.96□□□□□ -0.496e-6■■■■■ 63.9
ATRX-213ENST00000624032 EXOC1LA0A1B0GW35 172 aa11.96□□□□□ -0.5
ATRX-213ENST00000624032 C2CD2LO14523 706 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms