RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 C6orf106Q9H6K1 298 aaPredicted RBP11.48□□□□□ -0.57
LINC00963-214ENST00000622680 CYP3A43Q9HB55 503 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 ITM2CQ9NQX7 267 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 TM7SF3Q9NS93 570 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 TOR4AQ9NXH8 423 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 CLIC5Q9NZA1 410 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 MARCH2Q9P0N8 246 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 MAPK8IP1Q9UQF2 711 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 APOBEC2Q9Y235 224 aaKnown RBP11.48□□□□□ -0.57
LINC00963-214ENST00000622680 BTBD3Q9Y2F9 522 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 KIF26BQ2KJY2 2108 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 SLC12A8A0AV02 714 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 METTL12A8MUP2 240 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 TULP2O00295 520 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 TSPAN3O60637 253 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 ATXN1LP0C7T5 689 aaKnown RBP11.47□□□□□ -0.57
LINC00963-214ENST00000622680 ACADMP11310 421 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 HOXD9P28356 352 aaPredicted RBP11.47□□□□□ -0.57
LINC00963-214ENST00000622680 CHKAP35790 457 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 CSNK1EP49674 416 aaKnown RBP11.47□□□□□ -0.57
LINC00963-214ENST00000622680 COG7P83436 770 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 HLA-BQ31612 363 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 CCNI2Q6ZMN8 369 aaPredicted RBP11.47□□□□□ -0.57
LINC00963-214ENST00000622680 RSRC2Q7L4I2 434 aaKnown RBP11.47□□□□□ -0.57
LINC00963-214ENST00000622680 PIGZQ86VD9 579 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 FAM186BQ8IYM0 893 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 ZNF276Q8N554 614 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 SLC4A11Q8NBS3 891 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 CADM4Q8NFZ8 388 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 C1orf216Q8TAB5 229 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 CYB5D2Q8WUJ1 264 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 NDRG1Q92597 394 aaKnown RBP11.47□□□□□ -0.57
LINC00963-214ENST00000622680 SEMA4DQ92854 862 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 DCLK3Q9C098 648 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 CCDC86Q9H6F5 360 aaKnown RBP11.47□□□□□ -0.57
LINC00963-214ENST00000622680 ELOVL2Q9NXB9 296 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 ZNF510Q9Y2H8 683 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 RAXQ9Y2V3 346 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 NFE2L3Q9Y4A8 694 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 TRPM6Q9BX84 2022 aa11.47□□□□□ -0.57
LINC00963-214ENST00000622680 NPC1O15118 1278 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 CALUO43852 315 aaPredicted RBP11.46□□□□□ -0.57
LINC00963-214ENST00000622680 IGLV3-19P01714 112 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 CYBBP04839 570 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 ZNF883P0CG24 379 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 HLA-FP30511 346 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 ACSL1P33121 698 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 SGSHP51688 502 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 RAD23BP54727 409 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 YWHAGP61981 247 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC00963-214ENST00000622680 EIF4HQ15056 248 aaKnown RBP11.46□□□□□ -0.57
LINC00963-214ENST00000622680 FNDC3BQ53EP0 1204 aaKnown RBP11.46□□□□□ -0.57
LINC00963-214ENST00000622680 RAB41Q5JT25 222 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 INTS8Q75QN2 995 aaKnown RBP11.46□□□□□ -0.57
LINC00963-214ENST00000622680 BHLHA9Q7RTU4 235 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 GLRX5Q86SX6 157 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 PDZD3Q86UT5 571 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 ZC3H3Q8IXZ2 948 aaKnown RBP11.46□□□□□ -0.57
LINC00963-214ENST00000622680 CPXM2Q8N436 756 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 EEF2KMTQ96G04 330 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 HEXIM2Q96MH2 286 aaKnown RBP11.46□□□□□ -0.57
LINC00963-214ENST00000622680 CDK5RAP1Q96SZ6 601 aaKnown RBP11.46□□□□□ -0.57
LINC00963-214ENST00000622680 ULBP1Q9BZM6 244 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 LHX5Q9H2C1 402 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 TRAF3IP3Q9Y228 551 aa11.46□□□□□ -0.57
LINC00963-214ENST00000622680 MAPK13O15264 365 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 FLRT2O43155 660 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 MSI1O43347 362 aaKnown RBP11.45□□□□□ -0.58
LINC00963-214ENST00000622680 KRT13P13646 458 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 OXTRP30559 389 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 TKTL1P51854 596 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 ZNF132P52740 706 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 ARID5AQ03989 594 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 CAMK2GQ13555 558 aaPredicted RBP11.45□□□□□ -0.58
LINC00963-214ENST00000622680 GOLGA7BQ2TAP0 167 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 SOWAHCQ53LP3 525 aaPredicted RBP11.45□□□□□ -0.58
LINC00963-214ENST00000622680 CCDC157Q569K6 752 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 FMNL3Q8IVF7 1028 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 FAM217AQ8IXS0 508 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 CCDC150Q8NCX0 1101 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 WFDC5Q8TCV5 224 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 RHBDD1Q8TEB9 315 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 HNRNPLLQ8WVV9 542 aaKnown RBP11.45□□□□□ -0.58
LINC00963-214ENST00000622680 EDEM1Q92611 657 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 PLD4Q96BZ4 506 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 NUP58Q9BVL2 599 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 TMEM8AQ9HCN3 771 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 CISHQ9NSE2 258 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 ABCB8Q9NUT2 735 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 STRIP2Q9ULQ0 834 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.45□□□□□ -0.58
LINC00963-214ENST00000622680 SNX11Q9Y5W9 270 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 TENM4Q6N022 2769 aa11.45□□□□□ -0.58
LINC00963-214ENST00000622680 FLNBO75369 2602 aaKnown RBP11.45□□□□□ -0.58
LINC00963-214ENST00000622680 FAM149AA5PLN7 773 aa11.44□□□□□ -0.58
LINC00963-214ENST00000622680 KCNK3O14649 394 aa11.44□□□□□ -0.58
LINC00963-214ENST00000622680 ZBED1O96006 694 aa11.44□□□□□ -0.58
LINC00963-214ENST00000622680 MXI1P50539 228 aa11.44□□□□□ -0.58
LINC00963-214ENST00000622680 AFF3P51826 1226 aaKnown RBP11.44□□□□□ -0.58
LINC00963-214ENST00000622680 IL9RQ01113 521 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms