RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 TRMT10BQ6PF06 316 aaKnown RBP9.74□□□□□ -0.85
PDPN-212ENST00000621990 PAQR9Q6ZVX9 377 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 OSTM1Q86WC4 334 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 TRIM42Q8IWZ5 723 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 PYROXD2Q8N2H3 581 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.74□□□□□ -0.85
PDPN-212ENST00000621990 DNAJB3Q8WWF6 145 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 TTC17Q96AE7 1141 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 PTPN18Q99952 460 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 TUBB6Q9BUF5 446 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 UGT1A7Q9HAW7 530 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 UGT1A10Q9HAW8 530 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 UGT1A8Q9HAW9 530 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 IPPQ9Y573 584 aa9.74□□□□□ -0.85
PDPN-212ENST00000621990 TRIP12Q14669 1992 aaPredicted RBP9.74□□□□□ -0.85
PDPN-212ENST00000621990 OPHN1O60890 802 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 HUS1O60921 280 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 ZNF189O75820 626 aaPredicted RBP9.73□□□□□ -0.85
PDPN-212ENST00000621990 ZNF865P0CJ78 1059 aaPredicted RBP9.73□□□□□ -0.85
PDPN-212ENST00000621990 NPR3P17342 541 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 PTPN4P29074 926 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 NOS2P35228 1153 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 ARL4AP40617 200 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 GRIA1P42261 906 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 SARNPP82979 210 aaKnown RBP9.73□□□□□ -0.85
PDPN-212ENST00000621990 NIPAL4Q0D2K0 466 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 ADIGQ0VDE8 80 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 DPYSQ14117 519 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 KRT72Q14CN4 511 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 PAFAH1B3Q15102 231 aaKnown RBP9.73□□□□□ -0.85
PDPN-212ENST00000621990 TEX44Q53QW1 395 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 OLFML2BQ68BL8 750 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 MARK2Q7KZI7 788 aaKnown RBP9.73□□□□□ -0.85
PDPN-212ENST00000621990 TLK2Q86UE8 772 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 CCNJLQ8IV13 435 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 DEFB106AQ8N104 65 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 ARRDC4Q8NCT1 418 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 SH3TC2Q8TF17 1288 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 STAMBPL1Q96FJ0 436 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 APOL6Q9BWW8 343 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 IQCGQ9H095 443 aaKnown RBP9.73□□□□□ -0.85
PDPN-212ENST00000621990 ALG13Q9NP73 1137 aaKnown RBP9.73□□□□□ -0.85
PDPN-212ENST00000621990 RNF19AQ9NV58 838 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 KLK14Q9P0G3 267 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 DCTN4Q9UJW0 460 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.73□□□□□ -0.85
PDPN-212ENST00000621990 L3MBTL1Q9Y468 752 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 MFHAS1Q9Y4C4 1052 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 BIRC5O15392 142 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 MFSD11O43934 449 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 SNNO75324 88 aaPredicted RBP9.73□□□□□ -0.85
PDPN-212ENST00000621990 ANP32DO95626 131 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 PSEN2P49810 448 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 SULT1E1P49888 294 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 ARFIP2P53365 341 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 AIF1P55008 147 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 OCRLQ01968 901 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 NAB1Q13506 487 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 ZNF449Q6P9G9 518 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 DENND5BQ6ZUT9 1274 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 FAM131BQ86XD5 332 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 NME8Q8N427 588 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 FAM13CQ8NE31 585 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 FBXO41Q8TF61 875 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 RNF139Q8WU17 664 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 PPP1R10Q96QC0 940 aaKnown RBP9.73□□□□□ -0.85
PDPN-212ENST00000621990 SLC9A7Q96T83 725 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 TRIM56Q9BRZ2 755 aaKnown RBP9.73□□□□□ -0.85
PDPN-212ENST00000621990 SYT17Q9BSW7 474 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 TMEM120AQ9BXJ8 343 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 GOLGA2P5Q9HBQ8 144 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 NOP53Q9NZM5 478 aaKnown RBP9.73□□□□□ -0.85
PDPN-212ENST00000621990 HEY2Q9UBP5 337 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 C15orf41Q9Y2V0 281 aa9.73□□□□□ -0.85
PDPN-212ENST00000621990 A0A0G2JND7 137 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 H3BRJ5 948 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 PTGESO14684 152 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 TREHO43280 583 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 IGHA2P01877 340 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 SLC8A3P57103 927 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 SCAPQ12770 1279 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 ACCSLQ4AC99 568 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 SPRYD7Q5W111 196 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 CES4AQ5XG92 561 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 CLEC20AQ6ZU45 233 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 ACMSDQ8TDX5 336 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 LGMNQ99538 433 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 KCNK4Q9NYG8 393 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 MAD1L1Q9Y6D9 718 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 SDR42E2A6NKP2 422 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 C9IYK1 514 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 RNF103O00237 685 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 BEST1O76090 585 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 HAUS5O94927 633 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 PTPN1P18031 435 aaKnown RBP9.72□□□□□ -0.85
PDPN-212ENST00000621990 MAP2K2P36507 400 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 CPT1AP50416 773 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 GJA9P57773 515 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 WASHC5Q12768 1159 aa9.72□□□□□ -0.85
PDPN-212ENST00000621990 SEMA3BQ13214 749 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms