RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SLC24A3Q9HC58 644 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 CHST12Q9NRB3 414 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 ADAMTS5Q9UNA0 930 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 GOLGA8TH3BQL2 631 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 VAPBO95292 243 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 ENO3P13929 434 aaPredicted RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 PAPOLAP51003 745 aaKnown RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 TRMT5Q32P41 509 aaKnown RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 KLC3Q6P597 504 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 CMC1Q7Z7K0 106 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 OXNAD1Q96HP4 312 aaPredicted RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 NUF2Q9BZD4 464 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 RBM22Q9NW64 420 aaKnown RBP eCLIP5.8□□□□□ -1.481e-6■■■□□ 15.8
SYNCRIP-204ENST00000616122 DDX43Q9NXZ2 648 aaKnown RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 IPO11Q9UI26 975 aaKnown RBP5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 ARID1AO14497 2285 aa5.8□□□□□ -1.48
SYNCRIP-204ENST00000616122 ENO4A6NNW6 628 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 ERI2A8K979 691 aaKnown RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 DCXO43602 365 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 C2P06681 752 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 MYL4P12829 197 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 VHLP40337 213 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 NR2C2P49116 596 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 AP2B1P63010 937 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 CNGA3Q16281 694 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 NFE2Q16621 373 aaPredicted RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 PARP6Q2NL67 630 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 SHQ1Q6PI26 577 aaKnown RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 CXCL17Q6UXB2 119 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 UNC5AQ6ZN44 842 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 TRIM67Q6ZTA4 783 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 PIWIL1Q96J94 861 aaKnown RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 LRGUKQ96M69 825 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 MAGEB5Q9BZ81 275 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 PDZD7Q9H5P4 517 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 DENND2DQ9H6A0 471 aaPredicted RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 OR12D3Q9UGF7 316 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 NUDT5Q9UKK9 219 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 NRCAMQ92823 1304 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 GPR179Q6PRD1 2367 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 METTL18O95568 372 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 EDNRBP24530 442 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 CDH17Q12864 832 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 MSS51Q4VC12 460 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 THEM5Q8N1Q8 247 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 LRMDAQ9H2I8 198 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 Q9H521 79 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 ARHGEF4Q9NR80 690 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 E9PBE3 544 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 MDM4O15151 490 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 PRPF4O43172 522 aaKnown RBP eCLIP5.79□□□□□ -1.483e-7■■■□□ 18.4
SYNCRIP-204ENST00000616122 KLHL41O60662 606 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 GMNNO75496 209 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 MT-CO1P00395 513 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 NPR3P17342 541 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 PTPN1P18031 435 aaKnown RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 PTPN9P43378 593 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 MBTD1Q05BQ5 628 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 CRYMQ14894 314 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 CA9Q16790 459 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 ILDR2Q71H61 639 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 STRADAQ7RTN6 431 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 TMEM110Q86TL2 294 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 TLK2Q86UE8 772 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 WDTC1Q8N5D0 677 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 ATPAF2Q8N5M1 289 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 ZC3H15Q8WU90 426 aaKnown RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 APBB2Q92870 758 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 ATP6V1E2Q96A05 226 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 POPDC2Q9HBU9 364 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 EPS15L1Q9UBC2 864 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 ARHGAP26Q9UNA1 814 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 LRCH1Q9Y2L9 728 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 CACNA1SQ13698 1873 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 IGKV6-21A0A0C4DH24 114 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 DFFAO00273 331 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 FBXO21O94952 628 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 CLDN10P78369 228 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 POU6F1Q14863 301 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 KYAT3Q6YP21 454 aaKnown RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 NLGN2Q8NFZ4 835 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 OR52K1Q8NGK4 314 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 TTC8Q8TAM2 541 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 TEKT4Q8WW24 435 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 FAXDC2Q96IV6 333 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 KRT82Q9NSB4 513 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 KCNK4Q9NYG8 393 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 ADA2Q9NZK5 511 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 CICQ96RK0 1608 aaPredicted RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 WDR27A2RRH5 827 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 PHGDHO43175 533 aaKnown RBP5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 YBX3P16989 372 aaKnown RBP eCLIP5.79□□□□□ -1.481e-8■□□□□ 11.2
SYNCRIP-204ENST00000616122 CNTFP26441 200 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 KLRC2P26717 231 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 GRIA1P42261 906 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 SLC18A1P54219 525 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 LILRA4P59901 499 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 BEX3Q00994 111 aa5.79□□□□□ -1.48
SYNCRIP-204ENST00000616122 EFTUD2Q15029 972 aaKnown RBP eCLIP5.79□□□□□ -1.483e-8■■■■□ 21.8
SYNCRIP-204ENST00000616122 RELL1Q8IUW5 271 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms