RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 KITP10721 976 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 NDUFV1P49821 464 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 NSUN2Q08J23 767 aaKnown RBP eCLIP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 TARBP2Q15633 366 aaKnown RBP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 HABP4Q5JVS0 413 aaKnown RBP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 PIGWQ7Z7B1 504 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 PIGZQ86VD9 579 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 ZBED8Q8IZ13 594 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 MRPL45Q9BRJ2 306 aaKnown RBP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 PCMTD2Q9NV79 361 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 VANGL2Q9ULK5 521 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 DDX3XO00571 662 aaKnown RBP eCLIP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 HOXA2O43364 376 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 ITGBL1O95965 494 aaPredicted RBP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 LMNAP02545 664 aaKnown RBP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 VDRP11473 427 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 COL11A2P13942 1736 aaPredicted RBP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 MMP13P45452 471 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 GRB14Q14449 540 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 SPARCL1Q14515 664 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 SLC44A4Q53GD3 710 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 COBLL1Q53SF7 1204 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 TRIM72Q6ZMU5 477 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 RGS9BPQ6ZS82 235 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 FLCNQ8NFG4 579 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 ARHGEF26Q96DR7 871 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 PWWP2AQ96N64 755 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 LZTS1Q9Y250 596 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 H0YGN5 161 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 H3BRJ5 948 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 PPEF2O14830 753 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 PGM3O95394 542 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 STAMBPO95630 424 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 TPBGLP0DKB5 382 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 RTP1P59025 263 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 AUHQ13825 339 aaKnown RBP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 HIC1Q14526 733 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 NFE2Q16621 373 aaPredicted RBP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 IRGCQ6NXR0 463 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 RIBC1Q8N443 379 aaPredicted RBP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 DENND2DQ9H6A0 471 aaPredicted RBP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 ANLNQ9NQW6 1124 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 MRPL17Q9NRX2 175 aaKnown RBP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 NDE1Q9NXR1 346 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 LNPEPQ9UIQ6 1025 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 PCDHB5Q9Y5E4 795 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 MAFBQ9Y5Q3 323 aaPredicted RBP11.18□□□□□ -0.62
FAM3A-221ENST00000612856 NFS1Q9Y697 457 aa11.18□□□□□ -0.62
FAM3A-221ENST00000612856 MAP3K13O43283 966 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 TSPAN1O60635 241 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 PIAS1O75925 651 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 MICAL2O94851 1124 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 PTPN1P18031 435 aaKnown RBP11.17□□□□□ -0.62
FAM3A-221ENST00000612856 KRT33BQ14525 404 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 PPP2R5EQ16537 467 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 KHDC1Q4VXA5 237 aaKnown RBP11.17□□□□□ -0.62
FAM3A-221ENST00000612856 GRAMD4Q6IC98 578 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 SLC24A5Q71RS6 500 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 ARHGAP18Q8N392 663 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 SGIP1Q9BQI5 828 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 A0A0B4J269 797 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 C22orf31O95567 290 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 RPL21P46778 160 aaKnown RBP11.17□□□□□ -0.62
FAM3A-221ENST00000612856 BCAT1P54687 386 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 EPHB3P54753 998 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 ST8SIA6P61647 398 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 PRAMEP78395 509 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 ROR1Q01973 937 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 PDIA2Q13087 525 aaKnown RBP11.17□□□□□ -0.62
FAM3A-221ENST00000612856 ACAD10Q6JQN1 1059 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 LRRC74BQ6ZQY2 392 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 IRF2BP2Q7Z5L9 587 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 ECHDC2Q86YB7 292 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 ACTRT1Q8TDG2 376 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 SLC26A7Q8TE54 656 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 EXOC2Q96KP1 924 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 SIKE1Q9BRV8 207 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 THTPAQ9BU02 230 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 RHOBTB2Q9BYZ6 727 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 SLC13A1Q9BZW2 595 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 CDC42EP4Q9H3Q1 356 aaKnown RBP11.17□□□□□ -0.62
FAM3A-221ENST00000612856 KANSL3Q9P2N6 904 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 PPARGC1AQ9UBK2 798 aaKnown RBP11.17□□□□□ -0.62
FAM3A-221ENST00000612856 SFMBT1Q9UHJ3 866 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 VPS28Q9UK41 221 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 MUTP22033 750 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 RPL7AP62424 266 aaKnown RBP11.17□□□□□ -0.62
FAM3A-221ENST00000612856 MAPK7Q13164 816 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 ZNF792Q3KQV3 632 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 TTC17Q96AE7 1141 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 VPS11Q9H270 941 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 MSRAQ9UJ68 235 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 ANGPTL2Q9UKU9 493 aa11.17□□□□□ -0.62
FAM3A-221ENST00000612856 COL4A5P29400 1685 aa11.16□□□□□ -0.62
FAM3A-221ENST00000612856 APOL1O14791 398 aa11.16□□□□□ -0.62
FAM3A-221ENST00000612856 PJA2O43164 708 aa11.16□□□□□ -0.62
FAM3A-221ENST00000612856 USP12O75317 370 aa11.16□□□□□ -0.62
FAM3A-221ENST00000612856 JCHAINP01591 159 aa11.16□□□□□ -0.62
FAM3A-221ENST00000612856 ENO1P06733 434 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms