RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 ATF2P15336 505 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 DNAJB1P25685 340 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 L1CAMP32004 1257 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 COILP38432 576 aaPredicted RBP8.4□□□□□ -1.06
TARDBP-213ENST00000611963 TUFMP49411 452 aaKnown RBP8.4□□□□□ -1.06
TARDBP-213ENST00000611963 ERVFC1P60507 584 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 VSNL1P62760 191 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 TWF1Q12792 350 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 GPM6BQ13491 265 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 SKIV2LQ15477 1246 aaKnown RBP8.4□□□□□ -1.06
TARDBP-213ENST00000611963 CYP1B1Q16678 543 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 PPP6R3Q5H9R7 873 aaPredicted RBP8.4□□□□□ -1.06
TARDBP-213ENST00000611963 CCDC70Q6NSX1 233 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 SPATA31D4Q6ZUB0 917 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 BEND5Q7L4P6 421 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 TMC7Q7Z402 723 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 MON1AQ86VX9 555 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 C12orf50Q8NA57 414 aaPredicted RBP8.4□□□□□ -1.06
TARDBP-213ENST00000611963 ZNF461Q8TAF7 563 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 SPPL3Q8TCT6 385 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 POF1BQ8WVV4 589 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 MAIP1Q8WWC4 291 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 ANKRD7Q92527 254 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 CASP10Q92851 521 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 MRPL38Q96DV4 380 aaKnown RBP8.4□□□□□ -1.06
TARDBP-213ENST00000611963 TRIM51Q9BSJ1 452 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 TRIM62Q9BVG3 475 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 SMOC2Q9H3U7 446 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 RXFP1Q9HBX9 757 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 ANLNQ9NQW6 1124 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 ENTPD7Q9NQZ7 604 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.4□□□□□ -1.06
TARDBP-213ENST00000611963 ABCC13Q9NSE7 274 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 RRN3Q9NYV6 651 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.4□□□□□ -1.06
TARDBP-213ENST00000611963 FNIP2Q9P278 1114 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 SFMBT1Q9UHJ3 866 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 AMACRQ9UHK6 382 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 NOTCH4Q99466 2003 aa8.4□□□□□ -1.06
TARDBP-213ENST00000611963 TTC28Q96AY4 2481 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 ESYT3A0FGR9 886 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 FAM92AA1XBS5 289 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 TARSL2A2RTX5 802 aaKnown RBP8.39□□□□□ -1.07
TARDBP-213ENST00000611963 HIDE1A8MVS5 230 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 I6L893 689 aaPredicted RBP8.39□□□□□ -1.07
TARDBP-213ENST00000611963 GRM6O15303 877 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 IRAK2O43187 625 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 CST8O60676 142 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 TJP3O95049 919 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 TBX18O95935 607 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 RB1P06400 928 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 RARGP13631 454 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 PECAM1P16284 738 aaPredicted RBP8.39□□□□□ -1.07
TARDBP-213ENST00000611963 CHRNA3P32297 505 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 ELF1P32519 619 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 GGCXP38435 758 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 PTGIRP43119 386 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 ALDH1A3P47895 512 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 CXCR3P49682 368 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 KCNQ1P51787 676 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 TUBB4BP68371 445 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 GUCY2DQ02846 1103 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 CREMQ03060 361 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 EFEMP1Q12805 493 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 PLD1Q13393 1074 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 CAMK1Q14012 370 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 PDK2Q15119 407 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 DPYSL2Q16555 572 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 GLE1Q53GS7 698 aaKnown RBP8.39□□□□□ -1.07
TARDBP-213ENST00000611963 EFHC2Q5JST6 749 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 MSANTD2Q6P1R3 559 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 FBXO38Q6PIJ6 1188 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 NPNTQ6UXI9 565 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 BBS12Q6ZW61 710 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 SND1Q7KZF4 910 aaKnown RBP eCLIP8.39□□□□□ -1.07
TARDBP-213ENST00000611963 GSPT2Q8IYD1 628 aaKnown RBP8.39□□□□□ -1.07
TARDBP-213ENST00000611963 GPR65Q8IYL9 337 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 ARHGAP18Q8N392 663 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 PQLC3Q8N755 202 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 PCDH19Q8TAB3 1148 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 RNF139Q8WU17 664 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 RNF34Q969K3 372 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 PGAP3Q96FM1 320 aaPredicted RBP8.39□□□□□ -1.07
TARDBP-213ENST00000611963 KLHL5Q96PQ7 755 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 TCF25Q9BQ70 676 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 TTLL2Q9BWV7 592 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 SLITRK6Q9H5Y7 841 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 TLR8Q9NR97 1041 aaKnown RBP8.39□□□□□ -1.07
TARDBP-213ENST00000611963 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.39□□□□□ -1.07
TARDBP-213ENST00000611963 COMMD8Q9NX08 183 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 STIM2Q9P246 746 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 SAE1Q9UBE0 346 aaPredicted RBP8.39□□□□□ -1.07
TARDBP-213ENST00000611963 FBXW11Q9UKB1 542 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 SSX2IPQ9Y2D8 614 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 MFHAS1Q9Y4C4 1052 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 INSL5Q9Y5Q6 135 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 MYOFQ9NZM1 2061 aa8.39□□□□□ -1.07
TARDBP-213ENST00000611963 HELZP42694 1942 aaKnown RBP8.39□□□□□ -1.07
TARDBP-213ENST00000611963 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-213ENST00000611963 C2orf71A6NGG8 1288 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms