RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 PIWIL1Q96J94 861 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 VAT1Q99536 393 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 ARHGEF4Q9NR80 690 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 FBXO6Q9NRD1 293 aaPredicted RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 RRN3Q9NYV6 651 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 ACOT9Q9Y305 439 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 EDN1P05305 212 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 PGAM1P18669 254 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 PAMP19021 973 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 MGAT1P26572 445 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 PSEN2P49810 448 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 MAP3K7CLP57077 242 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 PRAMEP78395 509 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 BEX3Q00994 111 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 SLC25A11Q02978 314 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 MAPRE1Q15691 268 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 ARHGAP17Q68EM7 881 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 ACAD11Q709F0 780 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 NAT8LQ8N9F0 302 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 B3GALNT2Q8NCR0 500 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 SLC26A7Q8TE54 656 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 ANKRD27Q96NW4 1050 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 KCNK4Q9NYG8 393 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 RABGEF1Q9UJ41 708 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 CCDC160A6NGH7 325 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 PMPCBO75439 489 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 YY1P25490 414 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 PARP6Q2NL67 630 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 MMEL1Q495T6 779 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 CES3Q6UWW8 571 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 PRPF39Q86UA1 669 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 TTC30AQ86WT1 665 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 TMPRSS6Q8IU80 811 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 DCLK2Q8N568 766 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 CELF6Q96J87 481 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 SERPINI1Q99574 410 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 NFKBIZQ9BYH8 718 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 VRTNQ9H8Y1 702 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 PRDM16Q9HAZ2 1276 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 THAP1Q9NVV9 213 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 UBP1Q9NZI7 540 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 RPL26L1Q9UNX3 145 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 FNDC3AQ9Y2H6 1198 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 DERAQ9Y315 318 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 GOLGA8QA0A0J9YX86 632 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 BCLAF3A2AJT9 711 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 GOLGA8OA6NCC3 632 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 BTBD19C9JJ37 291 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 GOLGA8NF8WBI6 632 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 TRIM13O60858 407 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 ANXA9O76027 345 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 PDHA1P08559 390 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 KRT16P08779 473 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 PAPOLAP51003 745 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 ZNF157P51786 506 aaPredicted RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 COPAP53621 1224 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 WASHC2DQ5SRD0 308 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 SNX30Q5VWJ9 437 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 MFSD14CQ5VZR4 134 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 CRYBG2Q8N1P7 616 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 EIF2AQ9BY44 585 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 RCOR3Q9P2K3 495 aaPredicted RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 DCDC2Q9UHG0 476 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 SLC12A4Q9UP95 1085 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 A0A096LPK6 155 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 KCNA4P22459 653 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 SCNN1GP51170 649 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 CRADDP78560 199 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 MRPS5P82675 430 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 CUL3Q13618 768 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 CRYMQ14894 314 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 FAM187BQ17R55 369 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 SOWAHAQ2M3V2 549 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 MSS51Q4VC12 460 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 FNBP1LQ5T0N5 605 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 KLC3Q6P597 504 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 KYAT3Q6YP21 454 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 STRA8Q7Z7C7 330 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 KIRREL3Q8IZU9 778 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 ZFP42Q96MM3 310 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 KCNK16Q96T55 309 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 SPON2Q9BUD6 331 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 BRD8Q9H0E9 1235 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 OR12D3Q9UGF7 316 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 SOX13Q9UN79 622 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 CHKBQ9Y259 395 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 COL1A2P08123 1366 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 PABPN1LA6NDY0 278 aaKnown RBP6.55□□□□□ -1.36
SNX13-213ENST00000611725 MLNP12872 115 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 SMPD1P17405 629 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 DBN1Q16643 649 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 SPRED3Q2MJR0 410 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 C9orf57Q5W0N0 161 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 RYBPQ8N488 228 aaPredicted RBP6.55□□□□□ -1.36
SNX13-213ENST00000611725 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.55□□□□□ -1.36
SNX13-213ENST00000611725 NETO2Q8NC67 525 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 HDAC11Q96DB2 347 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 CMTM5Q96DZ9 223 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 MAGEB5Q9BZ81 275 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 PPEF2O14830 753 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms