RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 FSCN2O14926 492 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 GSTA4O15217 222 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 RGS20O76081 388 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 PYGLP06737 847 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 RPL22P35268 128 aaKnown RBP7.48□□□□□ -1.21
CSDE1-218ENST00000610726 NR2C2P49116 596 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 RENBPP51606 427 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 LILRA4P59901 499 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 MRPS5P82675 430 aaKnown RBP7.48□□□□□ -1.21
CSDE1-218ENST00000610726 MPP3Q13368 585 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 LAMB3Q13751 1172 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 LBRQ14739 615 aaKnown RBP7.48□□□□□ -1.21
CSDE1-218ENST00000610726 PLEKHA7Q6IQ23 1121 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 PMF1Q6P1K2 205 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 DCLRE1AQ6PJP8 1040 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 LCLAT1Q6UWP7 414 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 BBS12Q6ZW61 710 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 TRPM8Q7Z2W7 1104 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 LGMNQ99538 433 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 APOL5Q9BWW9 433 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 FTHL17Q9BXU8 183 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 DUSP16Q9BY84 665 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 NRDE2Q9H7Z3 1164 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 IRAK4Q9NWZ3 460 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 NSMCE4AQ9NXX6 385 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 RGS17Q9UGC6 210 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SFMBT1Q9UHJ3 866 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 R3HDM2Q9Y2K5 976 aaKnown RBP7.48□□□□□ -1.21
CSDE1-218ENST00000610726 LAMB4A4D0S4 1761 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 C10orf71Q711Q0 1435 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 C2orf81A6NN90 581 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 AOC2O75106 756 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 AMHP03971 560 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SERPINF2P08697 491 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 HIST1H2AGP0C0S8 130 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-218ENST00000610726 ERCC2P18074 760 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 HIST1H2ADP20671 130 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 MATKP42679 507 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 OLFML2BQ68BL8 750 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 MRNIPQ6NTE8 343 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SLC39A4Q6P5W5 647 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 C16orf59Q7L2K0 433 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 KIF2BQ8N4N8 673 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 TOP6BLQ8N6T0 577 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SLC4A11Q8NBS3 891 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.48□□□□□ -1.21
CSDE1-218ENST00000610726 USP6NLQ92738 828 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SDCCAG3Q96C92 435 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SPDL1Q96EA4 605 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 HIST1H2AHQ96KK5 128 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 HIST1H2AJQ99878 128 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 H2AFJQ9BTM1 129 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 EFHD1Q9BUP0 239 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 DRC3Q9H069 523 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 DPEP3Q9H4B8 488 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 CTNNAL1Q9UBT7 734 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 PCYOX1Q9UHG3 505 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 NOCTQ9UK39 431 aaKnown RBP7.48□□□□□ -1.21
CSDE1-218ENST00000610726 PCDHB8Q9UN66 801 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 COQ4Q9Y3A0 265 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SUPT3HB4E1H0 165 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SUPT3HO75486 399 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 BANF1O75531 89 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 RTN3O95197 1032 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-218ENST00000610726 VNN1O95497 513 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 CHRNB2P17787 502 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 ABCG1P45844 678 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 CPA2P48052 419 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 CUL3Q13618 768 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 TAF5Q15542 800 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 RAP1GAP2Q684P5 730 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SLC24A5Q71RS6 500 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SZRD1Q7Z422 152 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 PGBD3Q8N328 593 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 PLEKHO2Q8TD55 490 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 SNX19Q92543 992 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 UPF3AQ9H1J1 476 aaKnown RBP7.48□□□□□ -1.21
CSDE1-218ENST00000610726 LHX5Q9H2C1 402 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 RNF39Q9H2S5 420 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 LRRC19Q9H756 370 aa7.48□□□□□ -1.21
CSDE1-218ENST00000610726 ZMYM2Q9UBW7 1377 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 VAPBO95292 243 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 LCA5LO95447 670 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 SHBGP04278 402 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 LMO2P25791 158 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 PSMB4P28070 264 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 OR1D2P34982 312 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 ATP5C1P36542 298 aaKnown RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 RABGGTBP53611 331 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 ACTN3Q08043 901 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 MGAT5Q09328 741 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 CDH17Q12864 832 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 EFTUD2Q15029 972 aaKnown RBP eCLIP7.47□□□□□ -1.211e-9■□□□□ 8.8
CSDE1-218ENST00000610726 PKN2Q16513 984 aaKnown RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 FAM83EQ2M2I3 478 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 CPNE8Q86YQ8 564 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 TMA16Q96EY4 203 aaKnown RBP7.47□□□□□ -1.21
CSDE1-218ENST00000610726 ZNF558Q96NG5 402 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 CYP4F12Q9HCS2 524 aa7.47□□□□□ -1.21
CSDE1-218ENST00000610726 SCUBE2Q9NQ36 999 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms