RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 FAM217AQ8IXS0 508 aa13.99□□□□□ -0.17
POLR2J3-219ENST00000608621 RBBP8NLQ8NC74 664 aaPredicted RBP13.99□□□□□ -0.17
POLR2J3-219ENST00000608621 RNF139Q8WU17 664 aa13.99□□□□□ -0.17
POLR2J3-219ENST00000608621 DNASE2BQ8WZ79 361 aa13.99□□□□□ -0.17
POLR2J3-219ENST00000608621 EDEM1Q92611 657 aa13.99□□□□□ -0.17
POLR2J3-219ENST00000608621 PRCCQ92733 491 aaPredicted RBP13.99□□□□□ -0.17
POLR2J3-219ENST00000608621 CAMK1GQ96NX5 476 aa13.99□□□□□ -0.17
POLR2J3-219ENST00000608621 IPO9Q96P70 1041 aaKnown RBP13.99□□□□□ -0.17
POLR2J3-219ENST00000608621 RMND1Q9NWS8 449 aa13.99□□□□□ -0.17
POLR2J3-219ENST00000608621 SFMBT1Q9UHJ3 866 aa13.99□□□□□ -0.17
POLR2J3-219ENST00000608621 KLK13Q9UKR3 277 aa13.99□□□□□ -0.17
POLR2J3-219ENST00000608621 AKAP13Q12802 2813 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 YJEFN3A6XGL0 299 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 MEI4A8MW99 385 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 E7ENQ6 273 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 SLC16A3O15427 465 aaKnown RBP13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 SH3BP5O60239 455 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 GJB3O75712 270 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 ACADMP11310 421 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 VDRP11473 427 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 PRKCHP24723 683 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 OXTRP30559 389 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 RDXP35241 583 aaKnown RBP13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 HARS2P49590 506 aaKnown RBP13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 COPAP53621 1224 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 YWHAEP62258 255 aaKnown RBP13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 ARID5AQ03989 594 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 ADIGQ0VDE8 80 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 BST2Q10589 180 aaKnown RBP13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 SLC14A1Q13336 389 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 HNRNPDQ14103 355 aaKnown RBP13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 EIF4HQ15056 248 aaKnown RBP13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 COBLL1Q53SF7 1204 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 ZC3H3Q8IXZ2 948 aaKnown RBP13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 FMR1NBQ8N0W7 255 aaPredicted RBP13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 CHCHD4Q8N4Q1 142 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 CADM4Q8NFZ8 388 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 TMA16Q96EY4 203 aaKnown RBP13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 GSDMAQ96QA5 445 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 MIR1-1HGQ9H1L0 117 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 ABCC13Q9NSE7 274 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 KIAA1257Q9ULG3 409 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 MSRB2Q9Y3D2 182 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 HBS1LQ9Y450 684 aaKnown RBP13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 NEUROG3Q9Y4Z2 214 aa13.98□□□□□ -0.17
POLR2J3-219ENST00000608621 CFAP47Q6ZTR5 3102 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 IGF2RP11717 2491 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 A0A1B0GTW7 788 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 TRIM49BA6NDI0 452 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 TMEM8BA6NDV4 472 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 METTL12A8MUP2 240 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 H0Y626 953 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 TRIM16O95361 564 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 HLA-EP13747 358 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 LCP1P13796 627 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 HOXD9P28356 352 aaPredicted RBP13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 GRIK2Q13002 908 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 TRIP6Q15654 476 aaKnown RBP13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 DCAF12L1Q5VU92 463 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 SERPINA13PQ6UXR4 307 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 SIX6OS1Q8N1H7 587 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 ZCCHC9Q8N567 271 aaKnown RBP13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 UBR7Q8N806 425 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 KCTD13Q8WZ19 329 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 ERCC4Q92889 916 aaPredicted RBP13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 SLC35C1Q96A29 364 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 NUP58Q9BVL2 599 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 ARMCX3Q9UH62 379 aaPredicted RBP13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 NFE2L3Q9Y4A8 694 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 PCDHB9Q9Y5E1 797 aa13.97□□□□□ -0.17
POLR2J3-219ENST00000608621 O00370 1275 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 IGLV3-19P01714 112 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 SETSIPP0DME0 302 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 HLA-FP30511 346 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 RGS7P49802 495 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 DAOAP59103 153 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 PKDCCQ504Y2 493 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 ADGRF1Q5T601 910 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 CHST9Q7L1S5 443 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 FAM124AQ86V42 546 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 CACUL1Q86Y37 369 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 ENGASEQ8NFI3 743 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 OR2T3Q8NH03 318 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 CYB5D2Q8WUJ1 264 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 TFAP2BQ92481 460 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 SMARCE1Q969G3 411 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 ZDHHC5Q9C0B5 715 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 CNGB3Q9NQW8 809 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 ABCB8Q9NUT2 735 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 EIF2B4Q9UI10 523 aaKnown RBP13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 STOML2Q9UJZ1 356 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 PLA2G4CQ9UP65 541 aa13.96□□□□□ -0.17
POLR2J3-219ENST00000608621 ZFHX4Q86UP3 3567 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 GOLGA6L7A0A1B0GV03 622 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 FAM221BA6H8Z2 402 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 GOLGA6L4A6NEF3 574 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 RNF225M0QZC1 329 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 PIK3R2O00459 728 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 BCAT2O15382 392 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 MSI1O43347 362 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms