RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 CCT8P50990 548 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 COPAP53621 1224 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 BCAT1P54687 386 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 C21orf59P57076 290 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 ZNF445P59923 1031 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 ZBTB16Q05516 673 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 KIF19Q2TAC6 998 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 TTC31Q49AM3 519 aaPredicted RBP16.55■□□□□ 0.24
HDDC2-203ENST00000608284 RNF139Q8WU17 664 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 GOLGA1Q92805 767 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 PLD4Q96BZ4 506 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 UBXN6Q9BZV1 441 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 NIF3L1Q9GZT8 377 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 OSGEPQ9NPF4 335 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 OLA1Q9NTK5 396 aaKnown RBP16.55■□□□□ 0.24
HDDC2-203ENST00000608284 SUN2Q9UH99 717 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 SNX11Q9Y5W9 270 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 USP3Q9Y6I4 520 aa16.55■□□□□ 0.24
HDDC2-203ENST00000608284 E9PAM4 449 aa16.54■□□□□ 0.24
HDDC2-203ENST00000608284 FSBPO95073 299 aa16.54■□□□□ 0.24
HDDC2-203ENST00000608284 SEMA4FO95754 770 aa16.54■□□□□ 0.24
HDDC2-203ENST00000608284 ATP5BP06576 529 aaKnown RBP16.54■□□□□ 0.24
HDDC2-203ENST00000608284 PRKCHP24723 683 aa16.54■□□□□ 0.24
HDDC2-203ENST00000608284 GRIA4P48058 902 aa16.54■□□□□ 0.24
HDDC2-203ENST00000608284 YWHAGP61981 247 aaKnown RBP eCLIP16.54■□□□□ 0.24
HDDC2-203ENST00000608284 INTS8Q75QN2 995 aaKnown RBP16.54■□□□□ 0.24
HDDC2-203ENST00000608284 SCUBE3Q8IX30 993 aa16.54■□□□□ 0.24
HDDC2-203ENST00000608284 BAHD1Q8TBE0 780 aaPredicted RBP16.54■□□□□ 0.24
HDDC2-203ENST00000608284 GANCQ8TET4 914 aa16.54■□□□□ 0.24
HDDC2-203ENST00000608284 SORCS1Q8WY21 1168 aa16.54■□□□□ 0.24
HDDC2-203ENST00000608284 IGSF8Q969P0 613 aa16.54■□□□□ 0.24
HDDC2-203ENST00000608284 TWNKQ96RR1 684 aa16.54■□□□□ 0.24
HDDC2-203ENST00000608284 SGK2Q9HBY8 427 aa16.54■□□□□ 0.24
HDDC2-203ENST00000608284 FTSJ1Q9UET6 329 aa16.54■□□□□ 0.24
HDDC2-203ENST00000608284 ADAMTS20P59510 1910 aa16.54■□□□□ 0.24
HDDC2-203ENST00000608284 CDK4P11802 303 aa16.53■□□□□ 0.24
HDDC2-203ENST00000608284 HLA-EP13747 358 aa16.53■□□□□ 0.24
HDDC2-203ENST00000608284 RPL13P26373 211 aaKnown RBP16.53■□□□□ 0.24
HDDC2-203ENST00000608284 CD27P26842 260 aa16.53■□□□□ 0.24
HDDC2-203ENST00000608284 BNC1Q01954 994 aa16.53■□□□□ 0.24
HDDC2-203ENST00000608284 PDE4CQ08493 712 aa16.53■□□□□ 0.24
HDDC2-203ENST00000608284 STK4Q13043 487 aa16.53■□□□□ 0.24
HDDC2-203ENST00000608284 CAMK2GQ13555 558 aaPredicted RBP16.53■□□□□ 0.24
HDDC2-203ENST00000608284 ZNF394Q53GI3 561 aa16.53■□□□□ 0.24
HDDC2-203ENST00000608284 PPP1R26Q5T8A7 1209 aaPredicted RBP16.53■□□□□ 0.24
HDDC2-203ENST00000608284 TMA16Q96EY4 203 aaKnown RBP16.53■□□□□ 0.24
HDDC2-203ENST00000608284 ARID3AQ99856 593 aa16.53■□□□□ 0.24
HDDC2-203ENST00000608284 C6orf106Q9H6K1 298 aaPredicted RBP16.53■□□□□ 0.24
HDDC2-203ENST00000608284 TM9SF3Q9HD45 589 aa16.53■□□□□ 0.24
HDDC2-203ENST00000608284 CFAP45Q9UL16 551 aa16.53■□□□□ 0.24
HDDC2-203ENST00000608284 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.53■□□□□ 0.24
HDDC2-203ENST00000608284 FREM2Q5SZK8 3169 aa16.53■□□□□ 0.24
HDDC2-203ENST00000608284 MAPK13O15264 365 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 PCDHGA12O60330 932 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 TSPAN3O60637 253 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 RNASEH1O60930 286 aaKnown RBP16.52■□□□□ 0.24
HDDC2-203ENST00000608284 SLFN14P0C7P3 912 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 JUPP14923 745 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 ACSL1P33121 698 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 HNF1BP35680 557 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 GCLMP48507 274 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 KMT5BQ4FZB7 885 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 LRRC69Q6ZNQ3 347 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 CHST9Q7L1S5 443 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 TMPRSS12Q86WS5 348 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 ZNF557Q8N988 423 aaPredicted RBP16.52■□□□□ 0.24
HDDC2-203ENST00000608284 C1orf216Q8TAB5 229 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 IPO9Q96P70 1041 aaKnown RBP16.52■□□□□ 0.24
HDDC2-203ENST00000608284 ACE2Q9BYF1 805 aaPredicted RBP16.52■□□□□ 0.24
HDDC2-203ENST00000608284 KCTD10Q9H3F6 313 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 MMRN2Q9H8L6 949 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 TOR4AQ9NXH8 423 aa16.52■□□□□ 0.24
HDDC2-203ENST00000608284 URB1O60287 2271 aaKnown RBP16.52■□□□□ 0.23
HDDC2-203ENST00000608284 APC2O95996 2303 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 DKK1O94907 266 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 ZBED1O96006 694 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 MYL1P05976 194 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 POLR2EP19388 210 aaKnown RBP16.51■□□□□ 0.23
HDDC2-203ENST00000608284 ABCG1P45844 678 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 TKTL1P51854 596 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 ST8SIA6P61647 398 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 C19orf57Q0VDD7 668 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 SMAD1Q15797 465 aaKnown RBP16.51■□□□□ 0.23
HDDC2-203ENST00000608284 FOXD4L6Q3SYB3 417 aaPredicted RBP16.51■□□□□ 0.23
HDDC2-203ENST00000608284 C6orf118Q5T5N4 469 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 FOXD4L5Q5VV16 416 aaPredicted RBP16.51■□□□□ 0.23
HDDC2-203ENST00000608284 RESP18Q5W5W9 173 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 ATL3Q6DD88 541 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 FOXD4L3Q6VB84 417 aaPredicted RBP16.51■□□□□ 0.23
HDDC2-203ENST00000608284 FMNL3Q8IVF7 1028 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 CCDC117Q8IWD4 279 aaPredicted RBP16.51■□□□□ 0.23
HDDC2-203ENST00000608284 AHI1Q8N157 1196 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 CYB5D2Q8WUJ1 264 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 FOXD4L4Q8WXT5 416 aaPredicted RBP16.51■□□□□ 0.23
HDDC2-203ENST00000608284 BIRC7Q96CA5 298 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 TMEM176AQ96HP8 235 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 FAXDC2Q96IV6 333 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 DCBLD2Q96PD2 775 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 LRRC4Q9HBW1 653 aa16.51■□□□□ 0.23
HDDC2-203ENST00000608284 USP25Q9UHP3 1055 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms