RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 UNC5CO95185 931 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 ITGB3BPQ13352 177 aaPredicted RBP21.59■■□□□ 1.05
SH3D19-211ENST00000604030 ITPK1Q13572 414 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 ARHGAP17Q68EM7 881 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 ZCCHC7Q8N3Z6 543 aaKnown RBP21.59■■□□□ 1.05
SH3D19-211ENST00000604030 NFE2Q16621 373 aaPredicted RBP21.59■■□□□ 1.05
SH3D19-211ENST00000604030 ARHGAP22Q7Z5H3 698 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 TSEN2Q8NCE0 465 aaKnown RBP21.59■■□□□ 1.05
SH3D19-211ENST00000604030 TMEM39BQ9GZU3 492 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 CYP4F12Q9HCS2 524 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 STK39Q9UEW8 545 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 A0A087X1B8 175 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 ATXN8OSP0DMR3 200 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 CHRNA5P30532 468 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 TOP3AQ13472 1001 aaPredicted RBP21.59■■□□□ 1.05
SH3D19-211ENST00000604030 FAM131BQ86XD5 332 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 ATG16L2Q8NAA4 619 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 DEFB129Q9H1M3 183 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 ADAM28Q9UKQ2 775 aa21.59■■□□□ 1.05
SH3D19-211ENST00000604030 JCADQ9P266 1359 aa21.58■■□□□ 1.05
SH3D19-211ENST00000604030 MGAT4DA6NG13 374 aa21.58■■□□□ 1.05
SH3D19-211ENST00000604030 ZSCAN5CA6NGD5 496 aaPredicted RBP21.58■■□□□ 1.05
SH3D19-211ENST00000604030 PHGDHO43175 533 aaKnown RBP21.58■■□□□ 1.05
SH3D19-211ENST00000604030 HOXA2O43364 376 aa21.58■■□□□ 1.05
SH3D19-211ENST00000604030 CHI3L1P36222 383 aaPredicted RBP21.58■■□□□ 1.05
SH3D19-211ENST00000604030 DYRK1BQ9Y463 629 aa21.58■■□□□ 1.05
SH3D19-211ENST00000604030 A0A096LPK6 155 aa21.58■■□□□ 1.05
SH3D19-211ENST00000604030 VIL1P09327 827 aaKnown RBP21.58■■□□□ 1.05
SH3D19-211ENST00000604030 PIK3CGP48736 1102 aa21.58■■□□□ 1.05
SH3D19-211ENST00000604030 DDR2Q16832 855 aa21.58■■□□□ 1.05
SH3D19-211ENST00000604030 DGUOKQ16854 277 aa21.58■■□□□ 1.05
SH3D19-211ENST00000604030 TRIM71Q2Q1W2 868 aaKnown RBP21.58■■□□□ 1.05
SH3D19-211ENST00000604030 ARHGAP15Q53QZ3 475 aa21.58■■□□□ 1.05
SH3D19-211ENST00000604030 ANGEL2Q5VTE6 544 aaKnown RBP21.58■■□□□ 1.05
SH3D19-211ENST00000604030 METTL7BQ6UX53 244 aa21.58■■□□□ 1.05
SH3D19-211ENST00000604030 BRSK2Q8IWQ3 736 aa21.58■■□□□ 1.05
SH3D19-211ENST00000604030 MPP4Q96JB8 637 aa21.58■■□□□ 1.05
SH3D19-211ENST00000604030 TK2O00142 265 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 CYP3A4P08684 503 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 GYS1P13807 737 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 VAC14Q08AM6 782 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 CNGA2Q16280 664 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 TTMPQ5BVD1 217 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 DHRSXQ8N5I4 330 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 ELOVL6Q9H5J4 265 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 BLOC1S4Q9NUP1 217 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 TMCO1Q9UM00 188 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 ASS1P00966 412 aaKnown RBP21.58■■□□□ 1.04
SH3D19-211ENST00000604030 TRAF2Q12933 501 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 FRG1Q14331 258 aaKnown RBP21.58■■□□□ 1.04
SH3D19-211ENST00000604030 TTC27Q6P3X3 843 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 MAP4K3Q8IVH8 894 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 CCDC33Q8N5R6 958 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 ACTRT2Q8TDY3 377 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 DPY30Q9C005 99 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 SLC7A5P2Q9GIP4 190 aa21.58■■□□□ 1.04
SH3D19-211ENST00000604030 NKRFO15226 690 aaKnown RBP eCLIP21.57■■□□□ 1.045e-24■■□□□ 11.6
SH3D19-211ENST00000604030 MFSD7Q6UXD7 560 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 MIER2Q8N344 545 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 LRRN4CLQ8ND94 238 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 ZNF862O60290 1169 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 HMGCRP04035 888 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 NR6A1Q15406 480 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 C2CD6Q53TS8 623 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 GLRA4Q5JXX5 417 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 ANKS6Q68DC2 871 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 ARHGEF19Q8IW93 802 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 ACMSDQ8TDX5 336 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 POP1Q99575 1024 aaKnown RBP21.57■■□□□ 1.04
SH3D19-211ENST00000604030 ABI2Q9NYB9 513 aaPredicted RBP21.57■■□□□ 1.04
SH3D19-211ENST00000604030 HNRNPH3P31942 346 aaKnown RBP21.57■■□□□ 1.04
SH3D19-211ENST00000604030 ITGA1P56199 1179 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 TMEM62Q0P6H9 643 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 FBXO47Q5MNV8 452 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 ZNF544Q6NX49 715 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 OR56A4Q8NGH8 313 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 SYTL5Q8TDW5 730 aaPredicted RBP21.57■■□□□ 1.04
SH3D19-211ENST00000604030 RORBQ92753 470 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 FBXO32Q969P5 355 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 UTP6Q9NYH9 597 aaKnown RBP21.57■■□□□ 1.04
SH3D19-211ENST00000604030 IL1R1P14778 569 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 NAIF1Q69YI7 327 aaPredicted RBP21.57■■□□□ 1.04
SH3D19-211ENST00000604030 ARCQ7LC44 396 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 KRT73Q86Y46 540 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 EMC1Q8N766 993 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 C19orf18Q8NEA5 215 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 BTN2A2Q8WVV5 523 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 ATAD3AQ9NVI7 634 aa21.57■■□□□ 1.04
SH3D19-211ENST00000604030 ASTN2O75129 1339 aaPredicted RBP21.57■■□□□ 1.04
SH3D19-211ENST00000604030 OAZ1P54368 228 aa21.56■■□□□ 1.04
SH3D19-211ENST00000604030 IL5RAQ01344 420 aa21.56■■□□□ 1.04
SH3D19-211ENST00000604030 POLE3Q9NRF9 147 aa21.56■■□□□ 1.04
SH3D19-211ENST00000604030 BACE1P56817 501 aa21.56■■□□□ 1.04
SH3D19-211ENST00000604030 DCTN2Q13561 401 aaKnown RBP21.56■■□□□ 1.04
SH3D19-211ENST00000604030 NFIL3Q16649 462 aa21.56■■□□□ 1.04
SH3D19-211ENST00000604030 TTC30BQ8N4P2 665 aa21.56■■□□□ 1.04
SH3D19-211ENST00000604030 MIEF2Q96C03 454 aa21.56■■□□□ 1.04
SH3D19-211ENST00000604030 ZFYVE28Q9HCC9 887 aa21.56■■□□□ 1.04
SH3D19-211ENST00000604030 FAM220BPB1ANY3 271 aa21.56■■□□□ 1.04
SH3D19-211ENST00000604030 CCNG1P51959 295 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms