RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SPATA2LQ8IUW3 424 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 IRGQQ8WZA9 623 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 PGAP3Q96FM1 320 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 STMN4Q9H169 189 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 CNOT10Q9H9A5 744 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 KANSL3Q9P2N6 904 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 TBK1Q9UHD2 729 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 LGALS13Q9UHV8 139 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 ZNF638Q14966 1978 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 ARHGEF37A1IGU5 675 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 H3BRJ5 948 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 PGFP49763 221 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 DPYSQ14117 519 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 BBS9Q3SYG4 887 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 SLC39A12Q504Y0 691 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 IGDCC3Q8IVU1 814 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 ARHGEF2Q92974 986 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 NTAN1Q96AB6 310 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 PHACTR1Q9C0D0 580 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 EPN3Q9H201 632 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.62■□□□□ 0.411e-8■■■■■ 45.1
SHKBP1-216ENST00000598201 HCSTQ9UBK5 93 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 TET1Q8NFU7 2136 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 SMAPO00193 183 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 CHADO15335 359 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 OAZ2O95190 189 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 IVLP07476 585 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 VAV1P15498 845 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 CHN1P15882 459 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 SYN1P17600 705 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 SSTR1P30872 391 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 SCAPQ12770 1279 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 SEMA3BQ13214 749 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 RFX8Q6ZV50 586 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 TAC4Q86UU9 113 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 TP53INP2Q8IXH6 220 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 PDIK1LQ8N165 341 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 SCML4Q8N228 414 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 FBXO36Q8NEA4 188 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 PYROXD1Q8WU10 500 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 SCLYQ96I15 445 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 FAM193BQ96PV7 902 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 LGMNQ99538 433 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 CCDC77Q9BR77 488 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 COLEC11Q9BWP8 271 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 ETNK1Q9HBU6 452 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 PNPLA8Q9NP80 782 aa17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 PPANQ9NQ55 473 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-216ENST00000598201 COL4A4P53420 1690 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 EXOC1LA0A1B0GW35 172 aa17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 E7EVH7 732 aa17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 EEF2KO00418 725 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 TNFRSF10BO14763 440 aa17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 CDH16O75309 829 aa17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 AVILO75366 819 aa17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 METTL18O95568 372 aa17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 GRIK1P39086 918 aa17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 SLC5A3P53794 718 aa17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 IFRD2Q12894 506 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 AGGF1Q8N302 714 aaeCLIP17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 STKLD1Q8NE28 680 aa17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 CASD1Q96PB1 797 aa17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 ZCWPW1Q9H0M4 648 aa17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 PCDH10Q9P2E7 1040 aa17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 SNX10Q9Y5X0 201 aa17.61■□□□□ 0.41
SHKBP1-216ENST00000598201 DCLK1O15075 740 aa17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 GCATO75600 419 aa17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 CXCR3P49682 368 aa17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 C4orf50Q6ZRC1 276 aa17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 ELAC1Q9H777 363 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 ABI2Q9NYB9 513 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 RRN3Q9NYV6 651 aa17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 PCDHB7Q9Y5E2 793 aa17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 POC1B-GALNT4F8VUJ3 575 aa17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 TADA2AO75478 443 aa17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 AIF1P55008 147 aa17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 DQX1Q8TE96 717 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 TFB1MQ8WVM0 346 aaKnown RBP17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 MAML1Q92585 1016 aa17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 B3GALT6Q96L58 329 aa17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 RABGEF1Q9UJ41 708 aa17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 CHMP2BQ9UQN3 213 aa17.6■□□□□ 0.41
SHKBP1-216ENST00000598201 C5orf60A6NFR6 353 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 TRAPPC3O43617 180 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 PIAS1O75925 651 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 PARNO95453 639 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 ELK3P41970 407 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 MAGEA6P43360 314 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 EFTUD2Q15029 972 aaKnown RBP eCLIP17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 PAFAH1B3Q15102 231 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 VARS2Q5ST30 1063 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 SDHAF4Q5VUM1 108 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 HEATR6Q6AI08 1181 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 VSTM1Q6UX27 236 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 C3orf62Q6ZUJ4 267 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 TAOK1Q7L7X3 1001 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 SCN4BQ8IWT1 228 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 ABI1Q8IZP0 508 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 TMEM199Q8N511 208 aa17.59■□□□□ 0.41
SHKBP1-216ENST00000598201 ATP11CQ8NB49 1132 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms