RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 CADM4Q8NFZ8 388 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 RNF139Q8WU17 664 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 SORCS1Q8WY21 1168 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 SNX19Q92543 992 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 NDRG1Q92597 394 aaKnown RBP11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 PLD4Q96BZ4 506 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 EEF2KMTQ96G04 330 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 FAXDC2Q96IV6 333 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 ARID3AQ99856 593 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 NUP58Q9BVL2 599 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 SLC2A11Q9BYW1 496 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 ULBP1Q9BZM6 244 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 GAREM1Q9H706 876 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 LRRC4Q9HBW1 653 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 HESX1Q9UBX0 185 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 EIF2B4Q9UI10 523 aaKnown RBP11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 LHX6Q9UPM6 363 aa11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 APOBEC2Q9Y235 224 aaKnown RBP11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 URB1O60287 2271 aaKnown RBP11.05□□□□□ -0.64
CHMP2A-202ENST00000596708 TDRD6O60522 2096 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 CETN3O15182 167 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 STX10O60499 249 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 CER1O95813 267 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 ZBED1O96006 694 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 EPB41P11171 864 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 PRKCHP24723 683 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 MATKP42679 507 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 HARS2P49590 506 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 COPAP53621 1224 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 RING1Q06587 406 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 SCAPQ12770 1279 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 GOLGA7BQ2TAP0 167 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 FNDC3BQ53EP0 1204 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 TCERG1LQ5VWI1 586 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 TMEM215Q68D42 235 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 IL27RAQ6UWB1 636 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 LRSAM1Q6UWE0 723 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 KRBA2Q6ZNG9 492 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 FMNL3Q8IVF7 1028 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 ADAMTS14Q8WXS8 1223 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 TMA16Q96EY4 203 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 IL21RQ9HBE5 538 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 TM7SF3Q9NS93 570 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 OLA1Q9NTK5 396 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 SFMBT1Q9UHJ3 866 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 PLA2G4CQ9UP65 541 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 NFE2L3Q9Y4A8 694 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 FRYQ5TBA9 3013 aa11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 NYNRINQ9P2P1 1898 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-202ENST00000596708 MYLKQ15746 1914 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 CHD6Q8TD26 2715 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 TAF4O00268 1085 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 TULP2O00295 520 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 XPO1O14980 1071 aaKnown RBP11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 HOXB3P14651 431 aaPredicted RBP11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 CD19P15391 556 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 PDE4CQ08493 712 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 COL9A2Q14055 689 aaPredicted RBP11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 TRIP4Q15650 581 aaPredicted RBP11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 HLA-BQ31612 363 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 EDRF1Q3B7T1 1238 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 SGO2Q562F6 1265 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 DCAF17Q5H9S7 520 aaPredicted RBP11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 PM20D1Q6GTS8 502 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 CHST9Q7L1S5 443 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 ZNF366Q8N895 744 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 OR2T3Q8NH03 318 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 UBA3Q8TBC4 463 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 RHBDD1Q8TEB9 315 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 CYB5D2Q8WUJ1 264 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 EDEM1Q92611 657 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 CCDC34Q96HJ3 373 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 IPO9Q96P70 1041 aaKnown RBP11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 LHX5Q9H2C1 402 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 TSPAN16Q9UKR8 245 aa11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 MUC22E2RYF6 1773 aaPredicted RBP11.03□□□□□ -0.64
CHMP2A-202ENST00000596708 FAM237AA0A1B0GTK4 181 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 A0A1B0GVT2 93 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 ZNF202O95125 648 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 IGLV3-19P01714 112 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 HOXD9P28356 352 aaPredicted RBP11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 HLA-FP30511 346 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 CSNK1EP49674 416 aaKnown RBP11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 BCAT1P54687 386 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 YWHAEP62258 255 aaKnown RBP11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 ADIGQ0VDE8 80 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 BST2Q10589 180 aaKnown RBP11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 LRMPQ12912 555 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 SUZ12Q15022 739 aaKnown RBP11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 ZCWPW2Q504Y3 356 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 BSPRYQ5W0U4 402 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 SLCO6A1Q86UG4 719 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 PROSER1Q86XN7 944 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 FAM217AQ8IXS0 508 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 SMYD4Q8IYR2 804 aaPredicted RBP11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 SIX6OS1Q8N1H7 587 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 RBBP8NLQ8NC74 664 aaPredicted RBP11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 WFIKKN2Q8TEU8 576 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 TSG101Q99816 390 aa11.02□□□□□ -0.65
CHMP2A-202ENST00000596708 C6orf106Q9H6K1 298 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms