RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 PIK3R2O00459 728 aa26.45■■□□□ 1.82
ZNF558-203ENST00000595786 IRAK2O43187 625 aa26.45■■□□□ 1.82
ZNF558-203ENST00000595786 HOXD9P28356 352 aaPredicted RBP26.45■■□□□ 1.82
ZNF558-203ENST00000595786 GNA15P30679 374 aa26.45■■□□□ 1.82
ZNF558-203ENST00000595786 SLC11A2P49281 568 aa26.45■■□□□ 1.82
ZNF558-203ENST00000595786 STARD3Q14849 445 aa26.45■■□□□ 1.82
ZNF558-203ENST00000595786 MAN2A1Q16706 1144 aa26.45■■□□□ 1.82
ZNF558-203ENST00000595786 STPG1Q5TH74 334 aa26.45■■□□□ 1.82
ZNF558-203ENST00000595786 DENND1BQ6P3S1 775 aa26.45■■□□□ 1.82
ZNF558-203ENST00000595786 METTL3Q86U44 580 aaKnown RBP26.45■■□□□ 1.82
ZNF558-203ENST00000595786 SCUBE3Q8IX30 993 aa26.45■■□□□ 1.82
ZNF558-203ENST00000595786 CLEC4CQ8WTT0 213 aa26.45■■□□□ 1.82
ZNF558-203ENST00000595786 NUP62CLQ9H1M0 184 aa26.45■■□□□ 1.82
ZNF558-203ENST00000595786 ST7Q9NRC1 585 aa26.45■■□□□ 1.82
ZNF558-203ENST00000595786 CALCOCO1Q9P1Z2 691 aa26.45■■□□□ 1.82
ZNF558-203ENST00000595786 KHNYNO15037 678 aaKnown RBP26.44■■□□□ 1.82
ZNF558-203ENST00000595786 AP5Z1O43299 807 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 MSI1O43347 362 aaKnown RBP26.44■■□□□ 1.82
ZNF558-203ENST00000595786 THAP12O43422 761 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 NCAM1P13591 858 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 PON1P27169 355 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 TBX4P57082 545 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 KIAA1211LQ6NV74 962 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 ZNF557Q8N988 423 aaPredicted RBP26.44■■□□□ 1.82
ZNF558-203ENST00000595786 WFIKKN2Q8TEU8 576 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 SHC3Q92529 594 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 SERPINB11Q96P15 392 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 DDX50Q9BQ39 737 aaKnown RBP26.44■■□□□ 1.82
ZNF558-203ENST00000595786 SMOC1Q9H4F8 434 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 RXFP3Q9NSD7 469 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 CLEC4EQ9ULY5 219 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 GON4LQ3T8J9 2241 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 NCOR2Q9Y618 2525 aa26.44■■□□□ 1.82
ZNF558-203ENST00000595786 CNOT1A5YKK6 2376 aaKnown RBP26.43■■□□□ 1.82
ZNF558-203ENST00000595786 BECN2A8MW95 431 aa26.43■■□□□ 1.82
ZNF558-203ENST00000595786 TM4SF5O14894 197 aa26.43■■□□□ 1.82
ZNF558-203ENST00000595786 FYNP06241 537 aa26.43■■□□□ 1.82
ZNF558-203ENST00000595786 NDUFV2P19404 249 aa26.43■■□□□ 1.82
ZNF558-203ENST00000595786 HOXD12P35452 270 aa26.43■■□□□ 1.82
ZNF558-203ENST00000595786 RNF43Q68DV7 783 aa26.43■■□□□ 1.82
ZNF558-203ENST00000595786 SYT12Q8IV01 421 aa26.43■■□□□ 1.82
ZNF558-203ENST00000595786 MRGPRX1Q96LB2 322 aa26.43■■□□□ 1.82
ZNF558-203ENST00000595786 EVLQ9UI08 416 aaPredicted RBP26.43■■□□□ 1.82
ZNF558-203ENST00000595786 TLR6Q9Y2C9 796 aa26.43■■□□□ 1.82
ZNF558-203ENST00000595786 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.42■■□□□ 1.82
ZNF558-203ENST00000595786 WASH3PC4AMC7 463 aa26.42■■□□□ 1.82
ZNF558-203ENST00000595786 ACSL4O60488 711 aa26.42■■□□□ 1.82
ZNF558-203ENST00000595786 TSPAN3O60637 253 aa26.42■■□□□ 1.82
ZNF558-203ENST00000595786 ARHGAP44Q17R89 818 aa26.42■■□□□ 1.82
ZNF558-203ENST00000595786 PIK3R6Q5UE93 754 aa26.42■■□□□ 1.82
ZNF558-203ENST00000595786 GJB7Q6PEY0 223 aa26.42■■□□□ 1.82
ZNF558-203ENST00000595786 KIAA0907Q7Z7F0 614 aaPredicted RBP26.42■■□□□ 1.82
ZNF558-203ENST00000595786 TMEFF1Q8IYR6 380 aa26.42■■□□□ 1.82
ZNF558-203ENST00000595786 FRMD1Q8N878 549 aa26.42■■□□□ 1.82
ZNF558-203ENST00000595786 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.42■■□□□ 1.82
ZNF558-203ENST00000595786 DQX1Q8TE96 717 aaKnown RBP26.42■■□□□ 1.82
ZNF558-203ENST00000595786 FAM149B1Q96BN6 582 aa26.42■■□□□ 1.82
ZNF558-203ENST00000595786 IGHV1OR15-9A0A0B4J2B8 117 aa26.41■■□□□ 1.82
ZNF558-203ENST00000595786 USP8P40818 1118 aa26.41■■□□□ 1.82
ZNF558-203ENST00000595786 IL12RB1P42701 662 aa26.41■■□□□ 1.82
ZNF558-203ENST00000595786 DPCR1Q3MIW9 517 aa26.41■■□□□ 1.82
ZNF558-203ENST00000595786 LYSMD4Q5XG99 296 aa26.41■■□□□ 1.82
ZNF558-203ENST00000595786 PIGKQ92643 395 aa26.41■■□□□ 1.82
ZNF558-203ENST00000595786 SLC39A13Q96H72 371 aa26.41■■□□□ 1.82
ZNF558-203ENST00000595786 LHX5Q9H2C1 402 aa26.41■■□□□ 1.82
ZNF558-203ENST00000595786 NDST4Q9H3R1 872 aa26.41■■□□□ 1.82
ZNF558-203ENST00000595786 POPDC2Q9HBU9 364 aa26.41■■□□□ 1.82
ZNF558-203ENST00000595786 PCDHGC3Q9UN70 934 aa26.41■■□□□ 1.82
ZNF558-203ENST00000595786 RAD54BQ9Y620 910 aa26.41■■□□□ 1.82
ZNF558-203ENST00000595786 CAPN9O14815 690 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 PAPSS1O43252 624 aaPredicted RBP26.4■■□□□ 1.82
ZNF558-203ENST00000595786 SYNCRIPO60506 623 aaKnown RBP26.4■■□□□ 1.82
ZNF558-203ENST00000595786 HLA-FP30511 346 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 PTGER3P43115 390 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 YWHAZP63104 245 aaKnown RBP26.4■■□□□ 1.82
ZNF558-203ENST00000595786 RPL6Q02878 288 aaKnown RBP26.4■■□□□ 1.82
ZNF558-203ENST00000595786 PTK2Q05397 1052 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 ZNF234Q14588 700 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 VWA3BQ502W6 1294 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 PEAR1Q5VY43 1037 aaPredicted RBP26.4■■□□□ 1.82
ZNF558-203ENST00000595786 TMEM215Q68D42 235 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 TCEAL6Q6IPX3 200 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 TCEAL3Q969E4 200 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 FCRL2Q96LA5 508 aaPredicted RBP26.4■■□□□ 1.82
ZNF558-203ENST00000595786 TUBGCP2Q9BSJ2 902 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 EDEM2Q9BV94 578 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 CIPCQ9C0C6 399 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 CYTH4Q9UIA0 394 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 NAALADL1Q9UQQ1 740 aa26.4■■□□□ 1.82
ZNF558-203ENST00000595786 E5RJQ4 531 aa26.39■■□□□ 1.82
ZNF558-203ENST00000595786 GLI1P08151 1106 aa26.39■■□□□ 1.82
ZNF558-203ENST00000595786 SNX16P57768 344 aa26.39■■□□□ 1.82
ZNF558-203ENST00000595786 ARID5AQ03989 594 aa26.39■■□□□ 1.82
ZNF558-203ENST00000595786 PDCLQ13371 301 aa26.39■■□□□ 1.82
ZNF558-203ENST00000595786 FUT11Q495W5 492 aa26.39■■□□□ 1.82
ZNF558-203ENST00000595786 FAM133BQ5BKY9 247 aaKnown RBP26.39■■□□□ 1.82
ZNF558-203ENST00000595786 PPM1JQ5JR12 505 aa26.39■■□□□ 1.82
ZNF558-203ENST00000595786 SIX2Q9NPC8 291 aa26.39■■□□□ 1.82
ZNF558-203ENST00000595786 ACP6Q9NPH0 428 aa26.39■■□□□ 1.82
ZNF558-203ENST00000595786 LMBRD1Q9NUN5 540 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms