RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 RCOR1Q9UKL0 485 aa19.5■□□□□ 0.71
PDE4C-208ENST00000595343 A0A1B0GVT2 93 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 TIMM44O43615 452 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 KRT13P13646 458 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 ANP32AP39687 249 aaKnown RBP19.49■□□□□ 0.71
PDE4C-208ENST00000595343 YWHAGP61981 247 aaKnown RBP eCLIP19.49■□□□□ 0.71
PDE4C-208ENST00000595343 NFIL3Q16649 462 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 RAB41Q5JT25 222 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 DBX2Q6ZNG2 339 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 PIGZQ86VD9 579 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 FAM186BQ8IYM0 893 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 CCDC150Q8NCX0 1101 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 MDM1Q8TC05 714 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 PCED1AQ9H1Q7 454 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 TOR4AQ9NXH8 423 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 CFAP45Q9UL16 551 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 PCDHGB2Q9Y5G2 931 aa19.49■□□□□ 0.71
PDE4C-208ENST00000595343 PTPRBP23467 1997 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 CABIN1Q9Y6J0 2220 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 IGSF10Q6WRI0 2623 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 MYL1P05976 194 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 HLA-EP13747 358 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 PFKFB1P16118 471 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 CSNK1EP49674 416 aaKnown RBP19.48■□□□□ 0.71
PDE4C-208ENST00000595343 ARID5AQ03989 594 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 DNM1Q05193 864 aaKnown RBP19.48■□□□□ 0.71
PDE4C-208ENST00000595343 ENPEPQ07075 957 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 CAMK2GQ13555 558 aaPredicted RBP19.48■□□□□ 0.71
PDE4C-208ENST00000595343 COL28A1Q2UY09 1125 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 TMPRSS7Q7RTY8 843 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 SLC4A11Q8NBS3 891 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 OR2T3Q8NH03 318 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 RHBDD1Q8TEB9 315 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 SNX19Q92543 992 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 PLD4Q96BZ4 506 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 CDC6Q99741 560 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 ARID3AQ99856 593 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 C6orf106Q9H6K1 298 aaPredicted RBP19.48■□□□□ 0.71
PDE4C-208ENST00000595343 TMEM8AQ9HCN3 771 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 USP25Q9UHP3 1055 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 SLCO1B1Q9Y6L6 691 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 NUMA1Q14980 2115 aa19.48■□□□□ 0.71
PDE4C-208ENST00000595343 A0A1B0GVL5 298 aa19.47■□□□□ 0.71
PDE4C-208ENST00000595343 FLRT2O43155 660 aa19.47■□□□□ 0.71
PDE4C-208ENST00000595343 ATXN1LP0C7T5 689 aaKnown RBP19.47■□□□□ 0.71
PDE4C-208ENST00000595343 HOXD9P28356 352 aaPredicted RBP19.47■□□□□ 0.71
PDE4C-208ENST00000595343 AFF3P51826 1226 aaKnown RBP19.47■□□□□ 0.71
PDE4C-208ENST00000595343 RAD23BP54727 409 aa19.47■□□□□ 0.71
PDE4C-208ENST00000595343 TRIP4Q15650 581 aaPredicted RBP19.47■□□□□ 0.71
PDE4C-208ENST00000595343 MPPE1Q53F39 396 aa19.47■□□□□ 0.71
PDE4C-208ENST00000595343 KRT39Q6A163 491 aa19.47■□□□□ 0.71
PDE4C-208ENST00000595343 PDZD3Q86UT5 571 aa19.47■□□□□ 0.71
PDE4C-208ENST00000595343 SEMA4DQ92854 862 aa19.47■□□□□ 0.71
PDE4C-208ENST00000595343 TMEM176AQ96HP8 235 aa19.47■□□□□ 0.71
PDE4C-208ENST00000595343 LHX5Q9H2C1 402 aa19.47■□□□□ 0.71
PDE4C-208ENST00000595343 CISHQ9NSE2 258 aa19.47■□□□□ 0.71
PDE4C-208ENST00000595343 TSPAN3O60637 253 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 DKK1O94907 266 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 ZBED1O96006 694 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 HLA-FP30511 346 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 GTF2H1P32780 548 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 ACSL1P33121 698 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 PSMC2P35998 433 aaKnown RBP19.46■□□□□ 0.71
PDE4C-208ENST00000595343 TKTL1P51854 596 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 KIF19Q2TAC6 998 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 FNDC3BQ53EP0 1204 aaKnown RBP19.46■□□□□ 0.71
PDE4C-208ENST00000595343 ARHGAP17Q68EM7 881 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 PM20D1Q6GTS8 502 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 TTC39CQ8N584 583 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 ANKRD52Q8NB46 1076 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 NDRG1Q92597 394 aaKnown RBP19.46■□□□□ 0.71
PDE4C-208ENST00000595343 FAXDC2Q96IV6 333 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 ULBP1Q9BZM6 244 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 TMEM245Q9H330 911 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 MAPK8IP1Q9UQF2 711 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 BTBD3Q9Y2F9 522 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 RAXQ9Y2V3 346 aa19.46■□□□□ 0.71
PDE4C-208ENST00000595343 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.46■□□□□ 0.71
PDE4C-208ENST00000595343 RHOBTB3O94955 611 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 C7P10643 843 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 CMA1P23946 247 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 RPL13P26373 211 aaKnown RBP19.45■□□□□ 0.7
PDE4C-208ENST00000595343 HARS2P49590 506 aaKnown RBP19.45■□□□□ 0.7
PDE4C-208ENST00000595343 SLC8A3P57103 927 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 ADAM9Q13443 819 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 PKP1Q13835 747 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 SUZ12Q15022 739 aaKnown RBP19.45■□□□□ 0.7
PDE4C-208ENST00000595343 SOWAHCQ53LP3 525 aaPredicted RBP19.45■□□□□ 0.7
PDE4C-208ENST00000595343 BHLHA9Q7RTU4 235 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 FMNL3Q8IVF7 1028 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 ZNF366Q8N895 744 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 CYB5D2Q8WUJ1 264 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 SNX21Q969T3 373 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 OLA1Q9NTK5 396 aaKnown RBP19.45■□□□□ 0.7
PDE4C-208ENST00000595343 PLA2G4CQ9UP65 541 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 HPSEQ9Y251 543 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 SNX11Q9Y5W9 270 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 CELSR3Q9NYQ7 3312 aa19.45■□□□□ 0.7
PDE4C-208ENST00000595343 GOLGA4Q13439 2230 aaKnown RBP19.44■□□□□ 0.7
PDE4C-208ENST00000595343 GOLGA8CPA6NN73 597 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms