RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SMG1Q96Q15 3661 aaKnown RBP15.43■□□□□ 0.06
PNKP-202ENST00000593706 GJB3O75712 270 aa15.43■□□□□ 0.06
PNKP-202ENST00000593706 FTH1P19P0C7X4 201 aa15.43■□□□□ 0.06
PNKP-202ENST00000593706 OXTRP30559 389 aa15.43■□□□□ 0.06
PNKP-202ENST00000593706 MXI1P50539 228 aa15.43■□□□□ 0.06
PNKP-202ENST00000593706 TPMTP51580 245 aa15.43■□□□□ 0.06
PNKP-202ENST00000593706 PMS1P54277 932 aaKnown RBP15.43■□□□□ 0.06
PNKP-202ENST00000593706 ZNF234Q14588 700 aa15.43■□□□□ 0.06
PNKP-202ENST00000593706 EIF4HQ15056 248 aaKnown RBP15.43■□□□□ 0.06
PNKP-202ENST00000593706 SERPINA13PQ6UXR4 307 aa15.43■□□□□ 0.06
PNKP-202ENST00000593706 RAB44Q7Z6P3 723 aaPredicted RBP15.43■□□□□ 0.06
PNKP-202ENST00000593706 METTL3Q86U44 580 aaKnown RBP15.43■□□□□ 0.06
PNKP-202ENST00000593706 TMPRSS6Q8IU80 811 aa15.43■□□□□ 0.06
PNKP-202ENST00000593706 TTC39CQ8N584 583 aa15.43■□□□□ 0.06
PNKP-202ENST00000593706 P2RY11Q96G91 374 aa15.43■□□□□ 0.06
PNKP-202ENST00000593706 WSB2Q9NYS7 404 aaPredicted RBP15.43■□□□□ 0.06
PNKP-202ENST00000593706 AGO1Q9UL18 857 aaKnown RBP15.43■□□□□ 0.06
PNKP-202ENST00000593706 LHX6Q9UPM6 363 aa15.43■□□□□ 0.06
PNKP-202ENST00000593706 USP3Q9Y6I4 520 aa15.43■□□□□ 0.06
PNKP-202ENST00000593706 SLC12A8A0AV02 714 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 KCNJ18B7U540 433 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 SMC2O95347 1197 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 CER1O95813 267 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 EPHX1P07099 455 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 BMP6P22004 513 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 YWHAGP61981 247 aaKnown RBP eCLIP15.42■□□□□ 0.06
PNKP-202ENST00000593706 ADAM9Q13443 819 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 DCAF12L1Q5VU92 463 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 KRT39Q6A163 491 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 PIGZQ86VD9 579 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 CADM4Q8NFZ8 388 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 SNX19Q92543 992 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 PLD4Q96BZ4 506 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 EEF2KMTQ96G04 330 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 ITM2CQ9NQX7 267 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 CISHQ9NSE2 258 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 ELOVL2Q9NXB9 296 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 APOBEC2Q9Y235 224 aaKnown RBP15.42■□□□□ 0.06
PNKP-202ENST00000593706 NFE2L3Q9Y4A8 694 aa15.42■□□□□ 0.06
PNKP-202ENST00000593706 BCAT2O15382 392 aaPredicted RBP15.41■□□□□ 0.06
PNKP-202ENST00000593706 PRKCHP24723 683 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 MATKP42679 507 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 TKTL1P51854 596 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 RING1Q06587 406 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 ENPP2Q13822 863 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 FAM124AQ86V42 546 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 CPXM2Q8N436 756 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 PNPLA1Q8N8W4 532 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 SLC4A11Q8NBS3 891 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 FBXL13Q8NEE6 735 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 SETD7Q8WTS6 366 aaKnown RBP15.41■□□□□ 0.06
PNKP-202ENST00000593706 SORCS1Q8WY21 1168 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 DNASE2BQ8WZ79 361 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 SMARCE1Q969G3 411 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 TMEM176AQ96HP8 235 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 PIWIL1Q96J94 861 aaKnown RBP15.41■□□□□ 0.06
PNKP-202ENST00000593706 ARID3AQ99856 593 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 NUP58Q9BVL2 599 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 SLC2A11Q9BYW1 496 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 GAREM1Q9H706 876 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 MAN1B1Q9UKM7 699 aa15.41■□□□□ 0.06
PNKP-202ENST00000593706 FAM221BA6H8Z2 402 aa15.4■□□□□ 0.06
PNKP-202ENST00000593706 SLC16A3O15427 465 aaKnown RBP15.4■□□□□ 0.06
PNKP-202ENST00000593706 STX10O60499 249 aa15.4■□□□□ 0.06
PNKP-202ENST00000593706 CD44P16070 742 aaKnown RBP15.4■□□□□ 0.06
PNKP-202ENST00000593706 GTF2H1P32780 548 aa15.4■□□□□ 0.06
PNKP-202ENST00000593706 HARS2P49590 506 aaKnown RBP15.4■□□□□ 0.06
PNKP-202ENST00000593706 COPAP53621 1224 aa15.4■□□□□ 0.06
PNKP-202ENST00000593706 RAD23BP54727 409 aa15.4■□□□□ 0.06
PNKP-202ENST00000593706 COL9A2Q14055 689 aaPredicted RBP15.4■□□□□ 0.06
PNKP-202ENST00000593706 GOLGA7BQ2TAP0 167 aa15.4■□□□□ 0.06
PNKP-202ENST00000593706 FNDC3BQ53EP0 1204 aaKnown RBP15.4■□□□□ 0.06
PNKP-202ENST00000593706 ANKRD40Q6AI12 368 aa15.4■□□□□ 0.06
PNKP-202ENST00000593706 PROSER1Q86XN7 944 aa15.4■□□□□ 0.06
PNKP-202ENST00000593706 ADAMTS14Q8WXS8 1223 aa15.4■□□□□ 0.06
PNKP-202ENST00000593706 GTPBP4Q9BZE4 634 aaKnown RBP15.4■□□□□ 0.06
PNKP-202ENST00000593706 OLA1Q9NTK5 396 aaKnown RBP15.4■□□□□ 0.06
PNKP-202ENST00000593706 EIF2B4Q9UI10 523 aaKnown RBP15.4■□□□□ 0.06
PNKP-202ENST00000593706 CLEC4EQ9ULY5 219 aa15.4■□□□□ 0.06
PNKP-202ENST00000593706 TRIM49BA6NDI0 452 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 METTL12A8MUP2 240 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 TSPAN3O60637 253 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 ZBED1O96006 694 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 EPB41P11171 864 aaKnown RBP15.39■□□□□ 0.05
PNKP-202ENST00000593706 HLA-EP13747 358 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 HOXB3P14651 431 aaPredicted RBP15.39■□□□□ 0.05
PNKP-202ENST00000593706 BCAT1P54687 386 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 LRRC63Q05C16 580 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 MORC3Q14149 939 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 MPPE1Q53F39 396 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 RAB41Q5JT25 222 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 TCERG1LQ5VWI1 586 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 ARHGAP17Q68EM7 881 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 IL27RAQ6UWB1 636 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 FMNL3Q8IVF7 1028 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 ANKRD52Q8NB46 1076 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 RNF139Q8WU17 664 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 SEMA4DQ92854 862 aa15.39■□□□□ 0.05
PNKP-202ENST00000593706 IPO9Q96P70 1041 aaKnown RBP15.39■□□□□ 0.05
PNKP-202ENST00000593706 ULBP1Q9BZM6 244 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms