RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 C6orf106Q9H6K1 298 aaPredicted RBP19.15■□□□□ 0.66
CIRBP-238ENST00000592412 MARCH2Q9P0N8 246 aa19.15■□□□□ 0.66
CIRBP-238ENST00000592412 FRMD4BQ9Y2L6 1034 aa19.15■□□□□ 0.66
CIRBP-238ENST00000592412 RAXQ9Y2V3 346 aa19.15■□□□□ 0.66
CIRBP-238ENST00000592412 CABIN1Q9Y6J0 2220 aa19.15■□□□□ 0.66
CIRBP-238ENST00000592412 F13A1P00488 732 aa19.14■□□□□ 0.65
CIRBP-238ENST00000592412 ZSCAN22P10073 491 aaPredicted RBP19.14■□□□□ 0.65
CIRBP-238ENST00000592412 HOXD9P28356 352 aaPredicted RBP19.14■□□□□ 0.65
CIRBP-238ENST00000592412 ACSL1P33121 698 aa19.14■□□□□ 0.65
CIRBP-238ENST00000592412 CSNK1EP49674 416 aaKnown RBP19.14■□□□□ 0.65
CIRBP-238ENST00000592412 PKP1Q13835 747 aa19.14■□□□□ 0.65
CIRBP-238ENST00000592412 TMPRSS7Q7RTY8 843 aa19.14■□□□□ 0.65
CIRBP-238ENST00000592412 FAM124AQ86V42 546 aa19.14■□□□□ 0.65
CIRBP-238ENST00000592412 PIGZQ86VD9 579 aa19.14■□□□□ 0.65
CIRBP-238ENST00000592412 SLC4A11Q8NBS3 891 aa19.14■□□□□ 0.65
CIRBP-238ENST00000592412 SEMA4DQ92854 862 aa19.14■□□□□ 0.65
CIRBP-238ENST00000592412 SLC2A11Q9BYW1 496 aa19.14■□□□□ 0.65
CIRBP-238ENST00000592412 IMPG2Q9BZV3 1241 aa19.14■□□□□ 0.65
CIRBP-238ENST00000592412 PCDHGB2Q9Y5G2 931 aa19.14■□□□□ 0.65
CIRBP-238ENST00000592412 HELZ2Q9BYK8 2649 aaKnown RBP19.14■□□□□ 0.65
CIRBP-238ENST00000592412 SLC12A8A0AV02 714 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 TULP2O00295 520 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 TRIM21P19474 475 aaKnown RBP19.13■□□□□ 0.65
CIRBP-238ENST00000592412 NR2F2P24468 414 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 HLA-FP30511 346 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 MCCD1P59942 119 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-238ENST00000592412 CAMK2GQ13555 558 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-238ENST00000592412 TRIP4Q15650 581 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-238ENST00000592412 NFIL3Q16649 462 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 KIF19Q2TAC6 998 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 IL27RAQ6UWB1 636 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 SERPINA13PQ6UXR4 307 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 ZC3H3Q8IXZ2 948 aaKnown RBP19.13■□□□□ 0.65
CIRBP-238ENST00000592412 ZNF366Q8N895 744 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 OR2T3Q8NH03 318 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 DDI1Q8WTU0 396 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 NDRG1Q92597 394 aaKnown RBP19.13■□□□□ 0.65
CIRBP-238ENST00000592412 ARID3AQ99856 593 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 TMEM245Q9H330 911 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 MMRN2Q9H8L6 949 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 RCOR1Q9UKL0 485 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 TMEM131Q92545 1883 aa19.13■□□□□ 0.65
CIRBP-238ENST00000592412 FLRT2O43155 660 aa19.12■□□□□ 0.65
CIRBP-238ENST00000592412 CALUO43852 315 aaPredicted RBP19.12■□□□□ 0.65
CIRBP-238ENST00000592412 PRR29P0C7W0 189 aa19.12■□□□□ 0.65
CIRBP-238ENST00000592412 ACADMP11310 421 aa19.12■□□□□ 0.65
CIRBP-238ENST00000592412 RAD23BP54727 409 aa19.12■□□□□ 0.65
CIRBP-238ENST00000592412 YWHAGP61981 247 aaKnown RBP eCLIP19.12■□□□□ 0.65
CIRBP-238ENST00000592412 DNM1Q05193 864 aaKnown RBP19.12■□□□□ 0.65
CIRBP-238ENST00000592412 ARHGAP17Q68EM7 881 aa19.12■□□□□ 0.65
CIRBP-238ENST00000592412 LAYNQ6UX15 382 aa19.12■□□□□ 0.65
CIRBP-238ENST00000592412 INTS8Q75QN2 995 aaKnown RBP19.12■□□□□ 0.65
CIRBP-238ENST00000592412 HEXIM2Q96MH2 286 aaKnown RBP19.12■□□□□ 0.65
CIRBP-238ENST00000592412 BBC3Q96PG8 261 aaPredicted RBP19.12■□□□□ 0.65
CIRBP-238ENST00000592412 UBXN6Q9BZV1 441 aa19.12■□□□□ 0.65
CIRBP-238ENST00000592412 PCED1AQ9H1Q7 454 aa19.12■□□□□ 0.65
CIRBP-238ENST00000592412 TMEM8AQ9HCN3 771 aa19.12■□□□□ 0.65
CIRBP-238ENST00000592412 CISHQ9NSE2 258 aa19.12■□□□□ 0.65
CIRBP-238ENST00000592412 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.12■□□□□ 0.65
CIRBP-238ENST00000592412 SNX11Q9Y5W9 270 aa19.12■□□□□ 0.65
CIRBP-238ENST00000592412 A0A1B0GVL5 298 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 CYBBP04839 570 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 PFKFB1P16118 471 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 AFF3P51826 1226 aaKnown RBP19.11■□□□□ 0.65
CIRBP-238ENST00000592412 ENPEPQ07075 957 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 CAMK2BQ13554 666 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 PTPRNQ16849 979 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 KCNT1Q5JUK3 1230 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 PM20D1Q6GTS8 502 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 KIAA0907Q7Z7F0 614 aaPredicted RBP19.11■□□□□ 0.65
CIRBP-238ENST00000592412 ADIPOR2Q86V24 386 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 FAM186BQ8IYM0 893 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 RHBDD1Q8TEB9 315 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 CYB5D2Q8WUJ1 264 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 HNRNPLLQ8WVV9 542 aaKnown RBP19.11■□□□□ 0.65
CIRBP-238ENST00000592412 PLD4Q96BZ4 506 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 ORAI3Q9BRQ5 295 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 ULBP1Q9BZM6 244 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 LHX5Q9H2C1 402 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 TM9SF3Q9HD45 589 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 DKK4Q9UBT3 224 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 STRIP2Q9ULQ0 834 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.11■□□□□ 0.65
CIRBP-238ENST00000592412 MAPK8IP1Q9UQF2 711 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 HPSEQ9Y251 543 aa19.11■□□□□ 0.65
CIRBP-238ENST00000592412 CFAP46Q8IYW2 2715 aa19.1■□□□□ 0.65
CIRBP-238ENST00000592412 TIMM44O43615 452 aa19.1■□□□□ 0.65
CIRBP-238ENST00000592412 TSPAN3O60637 253 aa19.1■□□□□ 0.65
CIRBP-238ENST00000592412 ZBED1O96006 694 aa19.1■□□□□ 0.65
CIRBP-238ENST00000592412 SGSHP51688 502 aa19.1■□□□□ 0.65
CIRBP-238ENST00000592412 TKTL1P51854 596 aa19.1■□□□□ 0.65
CIRBP-238ENST00000592412 ZCWPW2Q504Y3 356 aa19.1■□□□□ 0.65
CIRBP-238ENST00000592412 RSRC2Q7L4I2 434 aaKnown RBP19.1■□□□□ 0.65
CIRBP-238ENST00000592412 FMNL3Q8IVF7 1028 aa19.1■□□□□ 0.65
CIRBP-238ENST00000592412 ARHGAP18Q8N392 663 aa19.1■□□□□ 0.65
CIRBP-238ENST00000592412 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.1■□□□□ 0.65
CIRBP-238ENST00000592412 ANKRD52Q8NB46 1076 aa19.1■□□□□ 0.65
CIRBP-238ENST00000592412 SNX19Q92543 992 aa19.1■□□□□ 0.65
CIRBP-238ENST00000592412 TMEM176AQ96HP8 235 aa19.1■□□□□ 0.65
CIRBP-238ENST00000592412 CDC6Q99741 560 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms