RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 UBXN6Q9BZV1 441 aa18.79■□□□□ 0.6
VAT1-208ENST00000590924 DNAJC17Q9NVM6 304 aaKnown RBP18.79■□□□□ 0.6
VAT1-208ENST00000590924 CLIC5Q9NZA1 410 aa18.79■□□□□ 0.6
VAT1-208ENST00000590924 A0A1W2PQJ5 194 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 F8VZ95 297 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 MDM4O15151 490 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 TRIM24O15164 1050 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 MED7O43513 233 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 KCNK5O95279 499 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 HOXB2P14652 356 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 CD19P15391 556 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 PMLP29590 882 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 NTSR1P30989 418 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 CLCN1P35523 988 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 USP8P40818 1118 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 STAT1P42224 750 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 MAP7D1Q3KQU3 841 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 SPDYCQ5MJ68 293 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 C10orf120Q5SQS8 335 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 N4BP2L1Q5TBK1 243 aaPredicted RBP18.78■□□□□ 0.6
VAT1-208ENST00000590924 LCLAT1Q6UWP7 414 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 SCD5Q86SK9 330 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 ANKRD52Q8NB46 1076 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 CDK5RAP1Q96SZ6 601 aaKnown RBP18.78■□□□□ 0.6
VAT1-208ENST00000590924 NLRC4Q9NPP4 1024 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 EVLQ9UI08 416 aaPredicted RBP18.78■□□□□ 0.6
VAT1-208ENST00000590924 NAGPAQ9UK23 515 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 NUDT5Q9UKK9 219 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 HCN2Q9UL51 889 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.78■□□□□ 0.6
VAT1-208ENST00000590924 PCDH15Q96QU1 1955 aa18.78■□□□□ 0.6
VAT1-208ENST00000590924 C4orf47A7E2U8 309 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 PATE3B3GLJ2 98 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 O00370 1275 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 STC2O76061 302 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 RALAP11233 206 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 GABRG2P18507 467 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 SOX5P35711 763 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 SLC8A3P57103 927 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 EGFLAMQ63HQ2 1017 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 TPGS1Q6ZTW0 290 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 MIB1Q86YT6 1006 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 PGBD3Q8N328 593 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 FRMD1Q8N878 549 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 ZNF606Q8WXB4 792 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 TFAP2BQ92481 460 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 PIGKQ92643 395 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 TRIM5Q9C035 493 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 TTYH3Q9C0H2 523 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 HESX1Q9UBX0 185 aa18.77■□□□□ 0.6
VAT1-208ENST00000590924 MBD1Q9UIS9 605 aaPredicted RBP18.77■□□□□ 0.6
VAT1-208ENST00000590924 MAP3K13O43283 966 aa18.76■□□□□ 0.59
VAT1-208ENST00000590924 CCDC172P0C7W6 258 aa18.76■□□□□ 0.59
VAT1-208ENST00000590924 GNA15P30679 374 aa18.76■□□□□ 0.59
VAT1-208ENST00000590924 DPP6P42658 865 aa18.76■□□□□ 0.59
VAT1-208ENST00000590924 DAB2IPQ5VWQ8 1189 aa18.76■□□□□ 0.59
VAT1-208ENST00000590924 SPECC1LQ69YQ0 1117 aa18.76■□□□□ 0.59
VAT1-208ENST00000590924 TOGARAM2Q6ZUX3 1019 aa18.76■□□□□ 0.59
VAT1-208ENST00000590924 SYT12Q8IV01 421 aa18.76■□□□□ 0.59
VAT1-208ENST00000590924 NUCKS1Q9H1E3 243 aaKnown RBP18.76■□□□□ 0.59
VAT1-208ENST00000590924 CD248Q9HCU0 757 aa18.76■□□□□ 0.59
VAT1-208ENST00000590924 TMEM9BQ9NQ34 198 aa18.76■□□□□ 0.59
VAT1-208ENST00000590924 TSPAN16Q9UKR8 245 aa18.76■□□□□ 0.59
VAT1-208ENST00000590924 ANGPTL2Q9UKU9 493 aa18.76■□□□□ 0.59
VAT1-208ENST00000590924 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.76■□□□□ 0.59
VAT1-208ENST00000590924 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 A0A1W2PQF6 199 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 CDX4O14627 284 aaPredicted RBP18.75■□□□□ 0.59
VAT1-208ENST00000590924 AP5Z1O43299 807 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 PTGER3P43115 390 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 DGKGP49619 791 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 BCAT1P54687 386 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 IRX4P78413 519 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 COG7P83436 770 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 SHC2P98077 582 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 TRIM14Q14142 442 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 RAB41Q5JT25 222 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 PEAR1Q5VY43 1037 aaPredicted RBP18.75■□□□□ 0.59
VAT1-208ENST00000590924 ZNF677Q86XU0 584 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 VSTM4Q8IW00 320 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 TMEFF1Q8IYR6 380 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 CHPFQ8IZ52 775 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 ZNF397Q8NF99 534 aaPredicted RBP18.75■□□□□ 0.59
VAT1-208ENST00000590924 BAP1Q92560 729 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 MRFAP1L1Q96HT8 127 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 GABRG3Q99928 467 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 CALCOCO1Q9P1Z2 691 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 FBXO10Q9UK96 956 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 CAPN11Q9UMQ6 739 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 PCDHGC3Q9UN70 934 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 ZNF510Q9Y2H8 683 aa18.75■□□□□ 0.59
VAT1-208ENST00000590924 PRRT4C9JH25 899 aa18.74■□□□□ 0.59
VAT1-208ENST00000590924 THAP12O43422 761 aa18.74■□□□□ 0.59
VAT1-208ENST00000590924 KLKB1P03952 638 aa18.74■□□□□ 0.59
VAT1-208ENST00000590924 CISD3P0C7P0 127 aa18.74■□□□□ 0.59
VAT1-208ENST00000590924 SETSIPP0DME0 302 aa18.74■□□□□ 0.59
VAT1-208ENST00000590924 CYP11B1P15538 503 aa18.74■□□□□ 0.59
VAT1-208ENST00000590924 FERP16591 822 aa18.74■□□□□ 0.59
VAT1-208ENST00000590924 HOXD12P35452 270 aa18.74■□□□□ 0.59
VAT1-208ENST00000590924 WASP42768 502 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms