RNA–Protein interactions for RNA: ENST00000589916.5

BCAS3-223, Transcript of BCAS3, microtubule associated cell migration factor, human

TSL 2

Gene BCAS3, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCAS3-223	ENST00000589916	ADGRF2	Q8IZF7	708 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	ELMOD1	Q8N336	334 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	MDGA1	Q8NFP4	955 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	TSTD1	Q8NFU3	115 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	RPLP0P6	Q8NHW5	317 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	USP33	Q8TEY7	942 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	FGF11	Q92914	225 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	TATDN2	Q93075	761 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	NXPE2	Q96DL1	559 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	TRIM11	Q96F44	468 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	SENP8	Q96LD8	212 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	PAAF1	Q9BRP4	392 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	XYLT2	Q9H1B5	865 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	GOLGA2P5	Q9HBQ8	144 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	APOBEC3G	Q9HC16	384 aa	Known RBP	5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	HPS4	Q9NQG7	708 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	ASAH2	Q9NR71	780 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	CISH	Q9NSE2	258 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	SEPT11	Q9NVA2	429 aa	Known RBP	5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	THG1L	Q9NWX6	298 aa	Known RBP	5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	HSFX1	Q9UBD0	423 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	HESX1	Q9UBX0	185 aa		5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	AFF4	Q9UHB7	1163 aa	Known RBP	5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916	PDCD11	Q14690	1871 aa	Known RBP	5.81	□□□□□ -1.48
BCAS3-223	ENST00000589916		A8MXQ7	604 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916		M0QZQ0	153 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	FOXN3	O00409	490 aa	Predicted RBP	5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	EPHB6	O15197	1021 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	CYP26A1	O43174	497 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	THAP12	O43422	761 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	CILP	O75339	1184 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	SEC24A	O95486	1093 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	CCDC175	P0C221	793 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	VDR	P11473	427 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	DES	P17661	470 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	WARS	P23381	471 aa	Known RBP	5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	ITPKA	P23677	461 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	ELAVL4	P26378	380 aa	Known RBP	5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	ELF1	P32519	619 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	AARS	P49588	968 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	CDR2	Q01850	454 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	SOX4	Q06945	474 aa	Predicted RBP	5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	TNK2	Q07912	1038 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	INCA1	Q0VD86	236 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	SGO2	Q562F6	1265 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	ZNF280D	Q6N043	979 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	GJB7	Q6PEY0	223 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	SLC36A4	Q6YBV0	504 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	KIAA1328	Q86T90	577 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	CEP57	Q86XR8	500 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	DCP1B	Q8IZD4	617 aa	Known RBP	5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	KIAA1958	Q8N8K9	716 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	NANOS1	Q8WY41	292 aa	Known RBP	5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	TMEM176A	Q96HP8	235 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	ZNF419	Q96HQ0	510 aa	Predicted RBP	5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	SUSD3	Q96L08	255 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	CALR3	Q96L12	384 aa	Known RBP	5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	HEXIM2	Q96MH2	286 aa	Known RBP	5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	KREMEN1	Q96MU8	473 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	AGPAT1	Q99943	283 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	TSGA10	Q9BZW7	698 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	HAUS4	Q9H6D7	363 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	SMYD3	Q9H7B4	428 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	POLR3B	Q9NW08	1133 aa	Predicted RBP	5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	MMP17	Q9ULZ9	603 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	CNTN6	Q9UQ52	1028 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	ASB3	Q9Y575	518 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	PCDHGA1	Q9Y5H4	931 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	PLXND1	Q9Y4D7	1925 aa		5.8	□□□□□ -1.48
BCAS3-223	ENST00000589916	ANK1	P16157	1881 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	OR6C75	A6NL08	312 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	EIF3CL	B5ME19	914 aa	Known RBP	5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	PRRG1	O14668	218 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	PPEF2	O14830	753 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	FLRT2	O43155	660 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	TNFSF14	O43557	240 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	ALDH1A2	O94788	518 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	NDUFA10	O95299	355 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	LSM8	O95777	96 aa	Known RBP	5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	CYP11A1	P05108	521 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	C1S	P09871	688 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	CYP11B1	P15538	503 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	ACO1	P21399	889 aa	Known RBP	5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	FECH	P22830	423 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	EIF4A3	P38919	411 aa	Known RBP	5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	NSF	P46459	744 aa	Known RBP	5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	KIF11	P52732	1056 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	NDST1	P52848	882 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	MRPS21	P82921	87 aa	Known RBP	5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	APBA1	Q02410	837 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	YWHAH	Q04917	246 aa	Predicted RBP	5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	GOLGA8F	Q08AF8	430 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	GOLGA8DP	Q0D2H9	430 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	SMARCB1	Q12824	385 aa		5.79	□□□□□ -1.48
BCAS3-223	ENST00000589916	KIF5A	Q12840	1032 aa		5.79	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms