RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 GUF1Q8N442 669 aaKnown RBP19.29■□□□□ 0.68
CCDC43-204ENST00000588687 SIPA1Q96FS4 1042 aa19.29■□□□□ 0.68
CCDC43-204ENST00000588687 SLC2A11Q9BYW1 496 aa19.29■□□□□ 0.68
CCDC43-204ENST00000588687 MMRN2Q9H8L6 949 aa19.29■□□□□ 0.68
CCDC43-204ENST00000588687 CISHQ9NSE2 258 aa19.29■□□□□ 0.68
CCDC43-204ENST00000588687 MAPK8IP1Q9UQF2 711 aa19.29■□□□□ 0.68
CCDC43-204ENST00000588687 CABIN1Q9Y6J0 2220 aa19.28■□□□□ 0.68
CCDC43-204ENST00000588687 KIF20AO95235 890 aa19.28■□□□□ 0.68
CCDC43-204ENST00000588687 GTF2H1P32780 548 aa19.28■□□□□ 0.68
CCDC43-204ENST00000588687 RDXP35241 583 aaKnown RBP19.28■□□□□ 0.68
CCDC43-204ENST00000588687 PSMC2P35998 433 aaKnown RBP19.28■□□□□ 0.68
CCDC43-204ENST00000588687 YWHAGP61981 247 aaKnown RBP eCLIP19.28■□□□□ 0.68
CCDC43-204ENST00000588687 SCAPQ12770 1279 aa19.28■□□□□ 0.68
CCDC43-204ENST00000588687 KRT39Q6A163 491 aa19.28■□□□□ 0.68
CCDC43-204ENST00000588687 CCNI2Q6ZMN8 369 aaPredicted RBP19.28■□□□□ 0.68
CCDC43-204ENST00000588687 DBX2Q6ZNG2 339 aa19.28■□□□□ 0.68
CCDC43-204ENST00000588687 CACUL1Q86Y37 369 aa19.28■□□□□ 0.68
CCDC43-204ENST00000588687 UCMAQ8WVF2 138 aa19.28■□□□□ 0.68
CCDC43-204ENST00000588687 PRCCQ92733 491 aaPredicted RBP19.28■□□□□ 0.68
CCDC43-204ENST00000588687 PLD4Q96BZ4 506 aa19.28■□□□□ 0.68
CCDC43-204ENST00000588687 TMEM176AQ96HP8 235 aa19.28■□□□□ 0.68
CCDC43-204ENST00000588687 TMEM245Q9H330 911 aa19.28■□□□□ 0.68
CCDC43-204ENST00000588687 STOML2Q9UJZ1 356 aa19.28■□□□□ 0.68
CCDC43-204ENST00000588687 GPSM3Q9Y4H4 160 aa19.28■□□□□ 0.68
CCDC43-204ENST00000588687 TP53BP1Q12888 1972 aaPredicted RBP19.28■□□□□ 0.68
CCDC43-204ENST00000588687 BPTFQ12830 3046 aa19.27■□□□□ 0.68
CCDC43-204ENST00000588687 SLC12A8A0AV02 714 aa19.27■□□□□ 0.68
CCDC43-204ENST00000588687 BCAT2O15382 392 aaPredicted RBP19.27■□□□□ 0.68
CCDC43-204ENST00000588687 KRT13P13646 458 aa19.27■□□□□ 0.68
CCDC43-204ENST00000588687 HLA-FP30511 346 aa19.27■□□□□ 0.68
CCDC43-204ENST00000588687 OXTRP30559 389 aa19.27■□□□□ 0.68
CCDC43-204ENST00000588687 NDUFA8P51970 172 aa19.27■□□□□ 0.68
CCDC43-204ENST00000588687 CAMK2GQ13555 558 aaPredicted RBP19.27■□□□□ 0.68
CCDC43-204ENST00000588687 ZC3H3Q8IXZ2 948 aaKnown RBP19.27■□□□□ 0.68
CCDC43-204ENST00000588687 ARHGAP18Q8N392 663 aa19.27■□□□□ 0.68
CCDC43-204ENST00000588687 ANKRD52Q8NB46 1076 aa19.27■□□□□ 0.68
CCDC43-204ENST00000588687 NDRG1Q92597 394 aaKnown RBP19.27■□□□□ 0.68
CCDC43-204ENST00000588687 HEXIM2Q96MH2 286 aaKnown RBP19.27■□□□□ 0.68
CCDC43-204ENST00000588687 CIPCQ9C0C6 399 aa19.27■□□□□ 0.68
CCDC43-204ENST00000588687 SYNCRIPO60506 623 aaKnown RBP19.26■□□□□ 0.67
CCDC43-204ENST00000588687 ZBED1O96006 694 aa19.26■□□□□ 0.67
CCDC43-204ENST00000588687 EPHX1P07099 455 aa19.26■□□□□ 0.67
CCDC43-204ENST00000588687 HLA-EP13747 358 aa19.26■□□□□ 0.67
CCDC43-204ENST00000588687 MXI1P50539 228 aa19.26■□□□□ 0.67
CCDC43-204ENST00000588687 TKTL1P51854 596 aa19.26■□□□□ 0.67
CCDC43-204ENST00000588687 KIAA0907Q7Z7F0 614 aaPredicted RBP19.26■□□□□ 0.67
CCDC43-204ENST00000588687 PIAS4Q8N2W9 510 aaPredicted RBP19.26■□□□□ 0.67
CCDC43-204ENST00000588687 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.26■□□□□ 0.67
CCDC43-204ENST00000588687 FBXL13Q8NEE6 735 aa19.26■□□□□ 0.67
CCDC43-204ENST00000588687 OR2T3Q8NH03 318 aa19.26■□□□□ 0.67
CCDC43-204ENST00000588687 NUP58Q9BVL2 599 aa19.26■□□□□ 0.67
CCDC43-204ENST00000588687 ULBP1Q9BZM6 244 aa19.26■□□□□ 0.67
CCDC43-204ENST00000588687 MIR1-1HGQ9H1L0 117 aa19.26■□□□□ 0.67
CCDC43-204ENST00000588687 PCED1AQ9H1Q7 454 aa19.26■□□□□ 0.67
CCDC43-204ENST00000588687 GAREM1Q9H706 876 aa19.26■□□□□ 0.67
CCDC43-204ENST00000588687 EIF2B4Q9UI10 523 aaKnown RBP19.26■□□□□ 0.67
CCDC43-204ENST00000588687 STRIP2Q9ULQ0 834 aa19.26■□□□□ 0.67
CCDC43-204ENST00000588687 CER1O95813 267 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 CYBBP04839 570 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 SYKP43405 635 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 SGSHP51688 502 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 ADAM9Q13443 819 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 PTPRNQ16849 979 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 HLA-BQ31612 363 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 EDRF1Q3B7T1 1238 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 SERPINA13PQ6UXR4 307 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 RSRC2Q7L4I2 434 aaKnown RBP19.25■□□□□ 0.67
CCDC43-204ENST00000588687 ADIPOR2Q86V24 386 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 TTC39CQ8N584 583 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 CCDC150Q8NCX0 1101 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 DDI1Q8WTU0 396 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 TATDN2Q93075 761 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 EEF2KMTQ96G04 330 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 C6orf106Q9H6K1 298 aaPredicted RBP19.25■□□□□ 0.67
CCDC43-204ENST00000588687 TM7SF3Q9NS93 570 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 RAB20Q9NX57 234 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.25■□□□□ 0.67
CCDC43-204ENST00000588687 PCDHB9Q9Y5E1 797 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 PCDHGB2Q9Y5G2 931 aa19.25■□□□□ 0.67
CCDC43-204ENST00000588687 GCN1Q92616 2671 aaKnown RBP19.25■□□□□ 0.67
CCDC43-204ENST00000588687 NYNRINQ9P2P1 1898 aaKnown RBP19.24■□□□□ 0.67
CCDC43-204ENST00000588687 A0A1B0GVT2 93 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 XPO1O14980 1071 aaKnown RBP19.24■□□□□ 0.67
CCDC43-204ENST00000588687 RPL13P26373 211 aaKnown RBP19.24■□□□□ 0.67
CCDC43-204ENST00000588687 ACSL1P33121 698 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 MATKP42679 507 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 PDE4CQ08493 712 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 GOLGA7BQ2TAP0 167 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 CBWD6Q4V339 395 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 CBWD3Q5JTY5 395 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 CBWD5Q5RIA9 395 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 FMNL3Q8IVF7 1028 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 UBR7Q8N806 425 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 ORAI3Q9BRQ5 295 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 GOLPH3LQ9H4A5 285 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 KIAA1522Q9P206 1035 aaPredicted RBP19.24■□□□□ 0.67
CCDC43-204ENST00000588687 TSPAN16Q9UKR8 245 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 APOBEC2Q9Y235 224 aaKnown RBP19.24■□□□□ 0.67
CCDC43-204ENST00000588687 BTBD3Q9Y2F9 522 aa19.24■□□□□ 0.67
CCDC43-204ENST00000588687 ZDHHC9Q9Y397 364 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms