RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 EIF4HQ15056 248 aaKnown RBP12.45□□□□□ -0.42
BRCA1-225ENST00000586385 TRIP4Q15650 581 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-225ENST00000586385 ZNF394Q53GI3 561 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 PIGZQ86VD9 579 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 ZNF366Q8N895 744 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 SPRYD3Q8NCJ5 442 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 OR2T3Q8NH03 318 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 CRELD1Q96HD1 420 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 ARID3AQ99856 593 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 CIPCQ9C0C6 399 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 EXOC1Q9NV70 894 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 MARCH2Q9P0N8 246 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 DKK4Q9UBT3 224 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-225ENST00000586385 SNX11Q9Y5W9 270 aa12.45□□□□□ -0.42
BRCA1-225ENST00000586385 MUC22E2RYF6 1773 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-225ENST00000586385 CABIN1Q9Y6J0 2220 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 PTPRBP23467 1997 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 SLC12A8A0AV02 714 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 MAPK13O15264 365 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 SYNCRIPO60506 623 aaKnown RBP12.44□□□□□ -0.42
BRCA1-225ENST00000586385 KIF20AO95235 890 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 ME1P48163 572 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 SGSHP51688 502 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 RAD23BP54727 409 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 PKP1Q13835 747 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 PTPRNQ16849 979 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 KIAA0907Q7Z7F0 614 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-225ENST00000586385 ADIPOR2Q86V24 386 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 SLC4A11Q8NBS3 891 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 WFDC5Q8TCV5 224 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 CYB5D2Q8WUJ1 264 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 UCMAQ8WVF2 138 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 DCLK3Q9C098 648 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 PCED1AQ9H1Q7 454 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 FAM13BQ9NYF5 915 aa12.44□□□□□ -0.42
BRCA1-225ENST00000586385 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.44□□□□□ -0.42
BRCA1-225ENST00000586385 SMG1Q96Q15 3661 aaKnown RBP12.44□□□□□ -0.42
BRCA1-225ENST00000586385 FAM149AA5PLN7 773 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 TRABD2BA6NFA1 517 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 FLRT2O43155 660 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 TSPAN3O60637 253 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 F13A1P00488 732 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 PRR29P0C7W0 189 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 ZSCAN22P10073 491 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-225ENST00000586385 YWHAGP61981 247 aaKnown RBP eCLIP12.43□□□□□ -0.42
BRCA1-225ENST00000586385 RPS14P62263 151 aaKnown RBP12.43□□□□□ -0.42
BRCA1-225ENST00000586385 NFIL3Q16649 462 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 ARHGAP17Q68EM7 881 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 PM20D1Q6GTS8 502 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 IL27RAQ6UWB1 636 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 SERPINA13PQ6UXR4 307 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 TADA2BQ86TJ2 420 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 CEP57L1Q8IYX8 460 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.43□□□□□ -0.42
BRCA1-225ENST00000586385 RHBDD1Q8TEB9 315 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 DDI1Q8WTU0 396 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 BIRC7Q96CA5 298 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 LMLNQ96KR4 655 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 HEXIM2Q96MH2 286 aaKnown RBP12.43□□□□□ -0.42
BRCA1-225ENST00000586385 CDK5RAP1Q96SZ6 601 aaKnown RBP12.43□□□□□ -0.42
BRCA1-225ENST00000586385 SLC2A11Q9BYW1 496 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 ULBP1Q9BZM6 244 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 UBXN6Q9BZV1 441 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 LHX5Q9H2C1 402 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 TM9SF3Q9HD45 589 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 OSGEPQ9NPF4 335 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 SCUBE2Q9NQ36 999 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 PRSS16Q9NQE7 514 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 STOML2Q9UJZ1 356 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 RCOR1Q9UKL0 485 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 FRMD4BQ9Y2L6 1034 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 ASXL3Q9C0F0 2248 aa12.43□□□□□ -0.42
BRCA1-225ENST00000586385 URB1O60287 2271 aaKnown RBP12.42□□□□□ -0.42
BRCA1-225ENST00000586385 GOLGA8CPA6NN73 597 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 C10orf142B7Z368 130 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 H0Y8X5 98 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 TIMM44O43615 452 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 GABBR2O75899 941 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 NR2F2P24468 414 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 AFF3P51826 1226 aaKnown RBP12.42□□□□□ -0.42
BRCA1-225ENST00000586385 TKTL1P51854 596 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 DNM1Q05193 864 aaKnown RBP12.42□□□□□ -0.42
BRCA1-225ENST00000586385 CYP4F3Q08477 520 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 ZCWPW2Q504Y3 356 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 FAM186BQ8IYM0 893 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 SNX19Q92543 992 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 TATDN2Q93075 761 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 PLD4Q96BZ4 506 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 MYO19Q96H55 970 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 TMEM176AQ96HP8 235 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 LRIG1Q96JA1 1093 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 CDC6Q99741 560 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 MTG2Q9H4K7 406 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 MMRN2Q9H8L6 949 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 TMEM8AQ9HCN3 771 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 CISHQ9NSE2 258 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 SFMBT1Q9UHJ3 866 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 MAPK8IP1Q9UQF2 711 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 HPSEQ9Y251 543 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms