RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ABCB4P21439 1286 aa14.36□□□□□ -0.11
PRKCSH-202ENST00000585540 CXCL12P48061 93 aa14.36□□□□□ -0.11
PRKCSH-202ENST00000585540 TCF15Q12870 199 aa14.36□□□□□ -0.11
PRKCSH-202ENST00000585540 SARM1Q6SZW1 724 aa14.36□□□□□ -0.11
PRKCSH-202ENST00000585540 SND1Q7KZF4 910 aaKnown RBP eCLIP14.36□□□□□ -0.119e-13■■■■■ 32
PRKCSH-202ENST00000585540 IRF2BP2Q7Z5L9 587 aa14.36□□□□□ -0.11
PRKCSH-202ENST00000585540 TMEM25Q86YD3 366 aa14.36□□□□□ -0.11
PRKCSH-202ENST00000585540 CAMKK1Q8N5S9 505 aa14.36□□□□□ -0.11
PRKCSH-202ENST00000585540 WFIKKN2Q8TEU8 576 aa14.36□□□□□ -0.11
PRKCSH-202ENST00000585540 SLC20A1Q8WUM9 679 aa14.36□□□□□ -0.11
PRKCSH-202ENST00000585540 TRIM11Q96F44 468 aa14.36□□□□□ -0.11
PRKCSH-202ENST00000585540 FCRL2Q96LA5 508 aaPredicted RBP14.36□□□□□ -0.11
PRKCSH-202ENST00000585540 FAM204AQ9H8W3 233 aa14.36□□□□□ -0.11
PRKCSH-202ENST00000585540 CAPN11Q9UMQ6 739 aa14.36□□□□□ -0.11
PRKCSH-202ENST00000585540 GFRA2O00451 464 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 MSI1O43347 362 aaKnown RBP14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 EGFP01133 1207 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 CHRNB2P17787 502 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 DGKGP49619 791 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 OXCT1P55809 520 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 KLHL30Q0D2K2 578 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 MTAPQ13126 283 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 SLC25A52Q3SY17 297 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 FYB2Q5VWT5 728 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 RNF43Q68DV7 783 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 TPGS1Q6ZTW0 290 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 SYT13Q7L8C5 426 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 CCDC117Q8IWD4 279 aaPredicted RBP14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 HJURPQ8NCD3 748 aaPredicted RBP14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 C3orf20Q8ND61 904 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 UCMAQ8WVF2 138 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 NT5C3BQ969T7 300 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 WBP2Q969T9 261 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 PIWIL1Q96J94 861 aaKnown RBP14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 DNAJC17Q9NVM6 304 aaKnown RBP14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 DDIT4Q9NX09 232 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 ADAM22Q9P0K1 906 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 TJP2Q9UDY2 1190 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 LUC7L2Q9Y383 392 aaKnown RBP14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 PCDHGA2Q9Y5H1 932 aa14.35□□□□□ -0.11
PRKCSH-202ENST00000585540 ANKRD62A6NC57 917 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 TIMM44O43615 452 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 RNF40O75150 1001 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 TNFAIP3P21580 790 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 CNR2P34972 360 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 NBL1P41271 181 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 ARID5AQ03989 594 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 EOGTQ5NDL2 527 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 SYPL2Q5VXT5 272 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 E4F1Q66K89 784 aaPredicted RBP14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 SPECC1LQ69YQ0 1117 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 ANKS1BQ7Z6G8 1248 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 VSTM4Q8IW00 320 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 DRC7Q8IY82 874 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 PHTF2Q8N3S3 785 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 USP33Q8TEY7 942 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 DDI1Q8WTU0 396 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 CPA5Q8WXQ8 436 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 NELL1Q92832 810 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 TMA16Q96EY4 203 aaKnown RBP14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 PPP1R9BQ96SB3 815 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 NPY6RQ99463 290 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 SYT11Q9BT88 431 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 SELENOOQ9BVL4 669 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 SEPT11Q9NVA2 429 aaKnown RBP14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 TMEM59LQ9UK28 342 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 SLC8A2Q9UPR5 921 aa14.34□□□□□ -0.11
PRKCSH-202ENST00000585540 CACNA1HO95180 2353 aa14.33□□□□□ -0.11
PRKCSH-202ENST00000585540 FAM170AA1A519 330 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 TBC1D3BA6NDS4 549 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 PROB1E7EW31 1015 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 F5H5T6 163 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 M0QYT0 321 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 GYPCP04921 128 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 SP9P0CG40 484 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 MYBL1P10243 752 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 RDXP35241 583 aaKnown RBP14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 PTPN9P43378 593 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 PIK3R6Q5UE93 754 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 ACAD10Q6JQN1 1059 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 MMS22LQ6ZRQ5 1243 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 MON1BQ7L1V2 547 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 STRADAQ7RTN6 431 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 C12orf40Q86WS4 652 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 RNF34Q969K3 372 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 NCAPGQ9BPX3 1015 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 C11orf70Q9BRQ4 267 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 TRIM5Q9C035 493 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 HAUS4Q9H6D7 363 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 RETREG1Q9H6L5 497 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 ZSCAN32Q9NX65 697 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 MMP17Q9ULZ9 603 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 MUC6Q6W4X9 2439 aa14.33□□□□□ -0.12
PRKCSH-202ENST00000585540 FANCMQ8IYD8 2048 aa14.32□□□□□ -0.12
PRKCSH-202ENST00000585540 KCNU1A8MYU2 1149 aa14.32□□□□□ -0.12
PRKCSH-202ENST00000585540 K7EQS6 105 aa14.32□□□□□ -0.12
PRKCSH-202ENST00000585540 SCAMP3O14828 347 aaKnown RBP14.32□□□□□ -0.12
PRKCSH-202ENST00000585540 ENDOD1O94919 500 aa14.32□□□□□ -0.12
PRKCSH-202ENST00000585540 SERPING1P05155 500 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms