RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 CNOT3O75175 753 aaKnown RBP4.15□□□□□ -1.75
VAPA-206ENST00000583475 ANXA6P08133 673 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 ITGA5P08648 1049 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 NDUFS1P28331 727 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 HOXA7P31268 230 aaPredicted RBP4.15□□□□□ -1.75
VAPA-206ENST00000583475 VPS41P49754 854 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 STIM1Q13586 685 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 GRM4Q14833 912 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 RBMS2Q15434 407 aaKnown RBP4.15□□□□□ -1.75
VAPA-206ENST00000583475 P3H1Q32P28 736 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 PXDC1Q5TGL8 231 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 PIP4P1Q86T03 277 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 GLCCI1Q86VQ1 547 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 SKAP1Q86WV1 359 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 RFX6Q8HWS3 928 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 SYTL1Q8IYJ3 562 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 NANOGP1Q8N7R0 232 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 Q8N9P0 234 aaPredicted RBP4.15□□□□□ -1.75
VAPA-206ENST00000583475 BCAS4Q8TDM0 211 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 IPO4Q8TEX9 1081 aaKnown RBP4.15□□□□□ -1.75
VAPA-206ENST00000583475 CUL5Q93034 780 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 MCRS1Q96EZ8 462 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 ZNF845Q96IR2 970 aaPredicted RBP4.15□□□□□ -1.75
VAPA-206ENST00000583475 FCRL4Q96PJ5 515 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 EIF3CQ99613 913 aaKnown RBP4.15□□□□□ -1.75
VAPA-206ENST00000583475 ELOVL1Q9BW60 279 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 CDCP1Q9H5V8 836 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 NLRC4Q9NPP4 1024 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 AFG3L2Q9Y4W6 797 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 PCDHB7Q9Y5E2 793 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 SPATA31A5Q5VU36 1347 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 SPATA31A7Q8IWB4 1347 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 GXYLT2A0PJZ3 443 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 C2CD4BA6NLJ0 364 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 PIP5K1BO14986 540 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 GLP2RO95838 553 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 PRF1P14222 555 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 SERPINB3P29508 390 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 PPM1AP35813 382 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 STAT6P42226 847 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 RPS13P62277 151 aaKnown RBP4.14□□□□□ -1.75
VAPA-206ENST00000583475 ID2Q02363 134 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 BTKQ06187 659 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 CSHL1Q14406 222 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 SLC9C1Q4G0N8 1177 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 SHC4Q6S5L8 630 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 RBM44Q6ZP01 1051 aaKnown RBP4.14□□□□□ -1.75
VAPA-206ENST00000583475 TTC30AQ86WT1 665 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 LAS2Q8IYD9 372 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 SLC22A17Q8WUG5 538 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 ASB12Q8WXK4 309 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 NPIPB3Q92617 1050 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 SENP7Q9BQF6 1050 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 TTLL2Q9BWV7 592 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 ZNF700Q9H0M5 742 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 KCNK9Q9NPC2 374 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 SLC52A1Q9NWF4 448 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 CDC23Q9UJX2 597 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 ZMYM2Q9UBW7 1377 aa4.14□□□□□ -1.75
VAPA-206ENST00000583475 CKAP5Q14008 2032 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 LOC105369274A0A096LPK9 316 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 LY6G6EA0A0G2JKS1 128 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 LOC102723532A0A0G2JNH3 316 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 SLC22A23A1A5C7 686 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 CER1O95813 267 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 ENO1P06733 434 aaKnown RBP4.13□□□□□ -1.75
VAPA-206ENST00000583475 SLC3A2P08195 630 aaKnown RBP4.13□□□□□ -1.75
VAPA-206ENST00000583475 CD63P08962 238 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 CYP19A1P11511 503 aaPredicted RBP4.13□□□□□ -1.75
VAPA-206ENST00000583475 NPPBP16860 134 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 RPS6KB1P23443 525 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 IL6STP40189 918 aaPredicted RBP4.13□□□□□ -1.75
VAPA-206ENST00000583475 CPA2P48052 419 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 SOX2P48431 317 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 DMWDQ09019 674 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 MTA1Q13330 715 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 TRIM71Q2Q1W2 868 aaKnown RBP4.13□□□□□ -1.75
VAPA-206ENST00000583475 SYCP2LQ5T4T6 812 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 XRRA1Q6P2D8 792 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 MRPL10Q7Z7H8 261 aaKnown RBP4.13□□□□□ -1.75
VAPA-206ENST00000583475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.13□□□□□ -1.75
VAPA-206ENST00000583475 OR4N4Q8N0Y3 316 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 NRACQ8N912 160 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 ACRBPQ8NEB7 543 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 PIGKQ92643 395 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 MUL1Q969V5 352 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 TRMT61AQ96FX7 289 aaKnown RBP4.13□□□□□ -1.75
VAPA-206ENST00000583475 TMEM41AQ96HV5 264 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 SCNM1Q9BWG6 230 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 FBXO28Q9NVF7 368 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 B3GNT3Q9Y2A9 372 aa4.13□□□□□ -1.75
VAPA-206ENST00000583475 KAT7O95251 611 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 IFIT2P09913 472 aaKnown RBP4.12□□□□□ -1.75
VAPA-206ENST00000583475 RFPL3SP0C7P2 107 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 ST6GAL1P15907 406 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 KLRK1P26718 216 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 SLC8A1P32418 973 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 TECP42680 631 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 SRSF1Q07955 248 aaKnown RBP eCLIP4.12□□□□□ -1.75
VAPA-206ENST00000583475 LAMB3Q13751 1172 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms