RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 CABIN1Q9Y6J0 2220 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 SLC12A8A0AV02 714 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 K7ELQ4 463 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-221ENST00000583080 FLRT2O43155 660 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 ACSL1P33121 698 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 VAMP7P51809 220 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 DBX2Q6ZNG2 339 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 CEP57L1Q8IYX8 460 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 CPXM2Q8N436 756 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 RHBDD1Q8TEB9 315 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 DDI1Q8WTU0 396 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 CDK5RAP1Q96SZ6 601 aaKnown RBP16.92■□□□□ 0.3
SREBF1-221ENST00000583080 LHX5Q9H2C1 402 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 MMRN2Q9H8L6 949 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.92■□□□□ 0.3
SREBF1-221ENST00000583080 PCDHGB2Q9Y5G2 931 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 SNX11Q9Y5W9 270 aa16.92■□□□□ 0.3
SREBF1-221ENST00000583080 FAM149AA5PLN7 773 aa16.91■□□□□ 0.3
SREBF1-221ENST00000583080 CYBBP04839 570 aa16.91■□□□□ 0.3
SREBF1-221ENST00000583080 SLFN14P0C7P3 912 aa16.91■□□□□ 0.3
SREBF1-221ENST00000583080 HOXD9P28356 352 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-221ENST00000583080 CAMK2GQ13555 558 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-221ENST00000583080 RSRC2Q7L4I2 434 aaKnown RBP16.91■□□□□ 0.3
SREBF1-221ENST00000583080 PIGZQ86VD9 579 aa16.91■□□□□ 0.3
SREBF1-221ENST00000583080 FAM217AQ8IXS0 508 aa16.91■□□□□ 0.3
SREBF1-221ENST00000583080 OR2T3Q8NH03 318 aa16.91■□□□□ 0.3
SREBF1-221ENST00000583080 CYB5D2Q8WUJ1 264 aa16.91■□□□□ 0.3
SREBF1-221ENST00000583080 ARID3AQ99856 593 aa16.91■□□□□ 0.3
SREBF1-221ENST00000583080 FRMD4BQ9Y2L6 1034 aa16.91■□□□□ 0.3
SREBF1-221ENST00000583080 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-221ENST00000583080 GOLGA4Q13439 2230 aaKnown RBP16.9■□□□□ 0.3
SREBF1-221ENST00000583080 KCNK3O14649 394 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 TSPAN3O60637 253 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 PDIA4P13667 645 aaKnown RBP16.9■□□□□ 0.3
SREBF1-221ENST00000583080 HLA-FP30511 346 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 AFF3P51826 1226 aaKnown RBP16.9■□□□□ 0.3
SREBF1-221ENST00000583080 YWHAGP61981 247 aaKnown RBP eCLIP16.9■□□□□ 0.3
SREBF1-221ENST00000583080 KCNT1Q5JUK3 1230 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 BHLHA9Q7RTU4 235 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 NDRG1Q92597 394 aaKnown RBP16.9■□□□□ 0.3
SREBF1-221ENST00000583080 CRELD1Q96HD1 420 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 LRIG1Q96JA1 1093 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 HEXIM2Q96MH2 286 aaKnown RBP16.9■□□□□ 0.3
SREBF1-221ENST00000583080 CDC6Q99741 560 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 SLC2A11Q9BYW1 496 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 PCED1AQ9H1Q7 454 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 TMEM245Q9H330 911 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 TM9SF3Q9HD45 589 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 DKK4Q9UBT3 224 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 STRIP2Q9ULQ0 834 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 TRAF3IP3Q9Y228 551 aa16.9■□□□□ 0.3
SREBF1-221ENST00000583080 URB1O60287 2271 aaKnown RBP16.89■□□□□ 0.29
SREBF1-221ENST00000583080 TULP2O00295 520 aa16.89■□□□□ 0.29
SREBF1-221ENST00000583080 MAPK13O15264 365 aa16.89■□□□□ 0.29
SREBF1-221ENST00000583080 NR2F2P24468 414 aa16.89■□□□□ 0.29
SREBF1-221ENST00000583080 ARID5AQ03989 594 aa16.89■□□□□ 0.29
SREBF1-221ENST00000583080 CYP4F3Q08477 520 aa16.89■□□□□ 0.29
SREBF1-221ENST00000583080 CAMK2BQ13554 666 aa16.89■□□□□ 0.29
SREBF1-221ENST00000583080 FNDC3BQ53EP0 1204 aaKnown RBP16.89■□□□□ 0.29
SREBF1-221ENST00000583080 CCDC157Q569K6 752 aa16.89■□□□□ 0.29
SREBF1-221ENST00000583080 RAB41Q5JT25 222 aa16.89■□□□□ 0.29
SREBF1-221ENST00000583080 ZC3H3Q8IXZ2 948 aaKnown RBP16.89■□□□□ 0.29
SREBF1-221ENST00000583080 SLC4A11Q8NBS3 891 aa16.89■□□□□ 0.29
SREBF1-221ENST00000583080 SEMA4DQ92854 862 aa16.89■□□□□ 0.29
SREBF1-221ENST00000583080 PLD4Q96BZ4 506 aa16.89■□□□□ 0.29
SREBF1-221ENST00000583080 SCUBE2Q9NQ36 999 aa16.89■□□□□ 0.29
SREBF1-221ENST00000583080 ANKRD6Q9Y2G4 727 aa16.89■□□□□ 0.29
SREBF1-221ENST00000583080 GCN1Q92616 2671 aaKnown RBP16.89■□□□□ 0.29
SREBF1-221ENST00000583080 TP53BP1Q12888 1972 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-221ENST00000583080 TRABD2BA6NFA1 517 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 H0Y8X5 98 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 CALUO43852 315 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-221ENST00000583080 SEMA4FO95754 770 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 F13A1P00488 732 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 GRIA4P48058 902 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 SGSHP51688 502 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 TKTL1P51854 596 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 RAD23BP54727 409 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 IL9RQ01113 521 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 TRIP4Q15650 581 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-221ENST00000583080 PTPRNQ16849 979 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 INTS8Q75QN2 995 aaKnown RBP16.88■□□□□ 0.29
SREBF1-221ENST00000583080 CHST9Q7L1S5 443 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 ADIPOR2Q86V24 386 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 FMNL3Q8IVF7 1028 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 FAM186BQ8IYM0 893 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 ARHGAP18Q8N392 663 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 BIRC7Q96CA5 298 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 ORAI3Q9BRQ5 295 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 ULBP1Q9BZM6 244 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 ABCB8Q9NUT2 735 aa16.88■□□□□ 0.29
SREBF1-221ENST00000583080 FSBPO95073 299 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 PRR29P0C7W0 189 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-221ENST00000583080 C7P10643 843 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 PFKFB1P16118 471 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 CCT8P50990 548 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 RPS14P62263 151 aaKnown RBP16.87■□□□□ 0.29
SREBF1-221ENST00000583080 TEAD4Q15561 434 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 MPPE1Q53F39 396 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms