RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 DEFB106AQ8N104 65 aa12.65□□□□□ -0.38
CCDC84-209ENST00000580556 ACRBPQ8NEB7 543 aa12.65□□□□□ -0.38
CCDC84-209ENST00000580556 RNF139Q8WU17 664 aa12.65□□□□□ -0.38
CCDC84-209ENST00000580556 ING5Q8WYH8 240 aa12.65□□□□□ -0.38
CCDC84-209ENST00000580556 ARHGEF26Q96DR7 871 aa12.65□□□□□ -0.38
CCDC84-209ENST00000580556 PGAP3Q96FM1 320 aaPredicted RBP12.65□□□□□ -0.38
CCDC84-209ENST00000580556 MCEEQ96PE7 176 aa12.65□□□□□ -0.38
CCDC84-209ENST00000580556 CCSER2Q9H7U1 834 aa12.65□□□□□ -0.38
CCDC84-209ENST00000580556 TRPV4Q9HBA0 871 aa12.65□□□□□ -0.38
CCDC84-209ENST00000580556 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCDC84-209ENST00000580556 DNMT3LQ9UJW3 386 aa12.65□□□□□ -0.38
CCDC84-209ENST00000580556 STAP1Q9ULZ2 295 aa12.65□□□□□ -0.38
CCDC84-209ENST00000580556 NDRG2Q9UN36 371 aaKnown RBP12.65□□□□□ -0.38
CCDC84-209ENST00000580556 RALGAPA1Q6GYQ0 2036 aa12.65□□□□□ -0.38
CCDC84-209ENST00000580556 DENND4CQ5VZ89 1909 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 FAM170AA1A519 330 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 C2orf78A6NCI8 922 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
CCDC84-209ENST00000580556 COCHO43405 550 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 GRAP2O75791 330 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 ABL1P00519 1130 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 IGLV3-25P01717 112 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 TCF3P15923 654 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 GJA1P17302 382 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 RFC1P35251 1148 aaPredicted RBP12.64□□□□□ -0.39
CCDC84-209ENST00000580556 ATP5C1P36542 298 aaKnown RBP12.64□□□□□ -0.39
CCDC84-209ENST00000580556 AVPR1AP37288 418 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 RPS9P46781 194 aaKnown RBP12.64□□□□□ -0.39
CCDC84-209ENST00000580556 KPNA1P52294 538 aaPredicted RBP12.64□□□□□ -0.39
CCDC84-209ENST00000580556 ZNF143P52747 638 aaPredicted RBP12.64□□□□□ -0.39
CCDC84-209ENST00000580556 PFKPQ01813 784 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 SLC25A52Q3SY17 297 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 HS1BP3Q53T59 392 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 DCAF6Q58WW2 860 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 C10orf120Q5SQS8 335 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 N4BP2L1Q5TBK1 243 aaPredicted RBP12.64□□□□□ -0.39
CCDC84-209ENST00000580556 PRR23CQ6ZRP0 262 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 BNIPLQ7Z465 357 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 CMTM8Q8IZV2 173 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 ZNF687Q8N1G0 1237 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 KIAA1958Q8N8K9 716 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 MAB21L3Q8N8X9 362 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 ZNF564Q8TBZ8 553 aaPredicted RBP12.64□□□□□ -0.39
CCDC84-209ENST00000580556 DQX1Q8TE96 717 aaKnown RBP12.64□□□□□ -0.39
CCDC84-209ENST00000580556 EDEM1Q92611 657 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 SERPINB11Q96P15 392 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 NPY6RQ99463 290 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 DESI2Q9BSY9 194 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 NUP85Q9BW27 656 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 SLC46A2Q9BY10 475 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 TSGA10Q9BZW7 698 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 KIF9Q9HAQ2 790 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 TRPC7Q9HCX4 862 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 SEMA4GQ9NTN9 838 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 ARHGAP26Q9UNA1 814 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 NAALADL1Q9UQQ1 740 aa12.64□□□□□ -0.39
CCDC84-209ENST00000580556 HBS1LQ9Y450 684 aaKnown RBP12.64□□□□□ -0.39
CCDC84-209ENST00000580556 FRYQ5TBA9 3013 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 ATRXP46100 2492 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 ANAPC1Q9H1A4 1944 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 ENDOD1O94919 500 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 CKMP06732 381 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 RETP07949 1114 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 PDGFRAP16234 1089 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 DESP17661 470 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 HDCP19113 662 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 GPD1P21695 349 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 PMLP29590 882 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 HOXC13P31276 330 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 SDC4P31431 198 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 RNASE9P60153 205 aaKnown RBP12.63□□□□□ -0.39
CCDC84-209ENST00000580556 RPL7AP62424 266 aaKnown RBP12.63□□□□□ -0.39
CCDC84-209ENST00000580556 RING1Q06587 406 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 DMWDQ09019 674 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 EIF4EBP2Q13542 120 aaPredicted RBP12.63□□□□□ -0.39
CCDC84-209ENST00000580556 ACAP1Q15027 740 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 STXBP5Q5T5C0 1151 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 SYPL2Q5VXT5 272 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 LAIR1Q6GTX8 287 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 TRNP1Q6NT89 227 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 PHLDB2Q86SQ0 1253 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 KIAA1328Q86T90 577 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 DDX42Q86XP3 938 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC84-209ENST00000580556 EMC1Q8N766 993 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 NIPA2Q8N8Q9 360 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 JOSD2Q8TAC2 188 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 RXFP2Q8WXD0 754 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 CENPIQ92674 756 aaPredicted RBP12.63□□□□□ -0.39
CCDC84-209ENST00000580556 SMARCD2Q92925 531 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 E2F7Q96AV8 911 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 NELL2Q99435 816 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 NCAPGQ9BPX3 1015 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 CNPY3Q9BT09 278 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 NACA2Q9H009 215 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 RNF38Q9H0F5 515 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 SLITRK6Q9H5Y7 841 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 OBP2AQ9NY56 170 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 MARCH2Q9P0N8 246 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 CTTNBP2NLQ9P2B4 639 aa12.63□□□□□ -0.39
CCDC84-209ENST00000580556 MYO1AQ9UBC5 1043 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms