RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 CNTN3Q9P232 1028 aa10.83□□□□□ -0.68
TOP3A-209ENST00000580095 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-209ENST00000580095 SMIM28A0A1B0GU29 152 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 KPNA7A9QM74 516 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 GYG2O15488 501 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 MGAT1P26572 445 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 PTPN4P29074 926 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 AFF1P51825 1210 aaKnown RBP10.82□□□□□ -0.68
TOP3A-209ENST00000580095 KPNB1Q14974 876 aaKnown RBP10.82□□□□□ -0.68
TOP3A-209ENST00000580095 FBXO47Q5MNV8 452 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 TREML1Q86YW5 311 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 IFNLR1Q8IU57 520 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-209ENST00000580095 NUDCD3Q8IVD9 361 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 ARRDC4Q8NCT1 418 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 BEST2Q8NFU1 509 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 OXNAD1Q96HP4 312 aaPredicted RBP10.82□□□□□ -0.68
TOP3A-209ENST00000580095 RSRC1Q96IZ7 334 aaKnown RBP10.82□□□□□ -0.68
TOP3A-209ENST00000580095 CLPTM1LQ96KA5 538 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 EBNA1BP2Q99848 306 aaKnown RBP10.82□□□□□ -0.68
TOP3A-209ENST00000580095 EBF4Q9BQW3 602 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 ZNF670Q9BS34 389 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 RNPEPL1Q9HAU8 725 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 SLC5A4Q9NY91 659 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 PPARGC1AQ9UBK2 798 aaKnown RBP10.82□□□□□ -0.68
TOP3A-209ENST00000580095 KIAA1257Q9ULG3 409 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.82□□□□□ -0.68
TOP3A-209ENST00000580095 A0A0G2JMZ2 1700 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 LRRC37A2A6NM11 1700 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 LOC285556D6RIA3 1793 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 GPR32O75388 356 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 MLH1P40692 756 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 SULT1E1P49888 294 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 ALDH18A1P54886 795 aaKnown RBP10.82□□□□□ -0.68
TOP3A-209ENST00000580095 AQP5P55064 265 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 CDK16Q00536 496 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 POU5F1BQ06416 359 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 PIGZQ86VD9 579 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 SHKBP1Q8TBC3 707 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 WDR60Q8WVS4 1066 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 AZIN2Q96A70 460 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 MOCOSQ96EN8 888 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 SHCBP1LQ9BZQ2 653 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 SNX25Q9H3E2 840 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 ZNF358Q9NW07 568 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 SNX10Q9Y5X0 201 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 HTTP42858 3142 aa10.82□□□□□ -0.68
TOP3A-209ENST00000580095 FAM72CH0Y354 149 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 RNF103O00237 685 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 DPYSL4O14531 572 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 MDM4O15151 490 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 PYGLP06737 847 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 TPBGLP0DKB5 382 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 ERVK-10P10266 1014 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 ESRRAP11474 423 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-209ENST00000580095 CYP2C9P11712 490 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 PSMB4P28070 264 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 EPHX2P34913 555 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 RPL10AP62906 217 aaKnown RBP10.81□□□□□ -0.68
TOP3A-209ENST00000580095 BST2Q10589 180 aaKnown RBP10.81□□□□□ -0.68
TOP3A-209ENST00000580095 TAF11Q15544 211 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 ZBTB6Q15916 424 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 DPYSL2Q16555 572 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 PARP6Q2NL67 630 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 FAM72AQ5TYM5 149 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 FAM72DQ6L9T8 149 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 OSTM1Q86WC4 334 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 FAM72BQ86X60 149 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 CDKL3Q8IVW4 592 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-209ENST00000580095 ADGRF2Q8IZF7 708 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 ANKRD52Q8NB46 1076 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 DRAXINQ8NBI3 349 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-209ENST00000580095 COLGALT1Q8NBJ5 622 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 RNF169Q8NCN4 708 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 NPLOC4Q8TAT6 608 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 TEKT4Q8WW24 435 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 HTR3CQ8WXA8 447 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 E2F7Q96AV8 911 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 SKA1Q96BD8 255 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 RTP4Q96DX8 246 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 PTCD3Q96EY7 689 aaKnown RBP10.81□□□□□ -0.68
TOP3A-209ENST00000580095 APOL2Q9BQE5 337 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 GCOM2Q9BZD3 368 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-209ENST00000580095 PHACTR1Q9C0D0 580 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 TAS2R1Q9NYW7 299 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 CCL15-CCL14A0A0B4J2E2 113 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.81□□□□□ -0.68
TOP3A-209ENST00000580095 H3BRJ5 948 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 I3L4J1 428 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 TREHO43280 583 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 ITM2AO43736 263 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 ATP5HO75947 161 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 KRT36O76013 467 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 SMIM10L2AP0DMW4 78 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 SMIM10L2BP0DMW5 78 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 PRKCHP24723 683 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 BEX3Q00994 111 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 UBAP2LQ14157 1087 aaKnown RBP10.81□□□□□ -0.68
TOP3A-209ENST00000580095 CCL15Q16663 113 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 DGKDQ16760 1214 aa10.81□□□□□ -0.68
TOP3A-209ENST00000580095 SPNS2Q8IVW8 549 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms