RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 CNPY3Q9BT09 278 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 TMEM121BQ9BXQ6 578 aaPredicted RBP10.49□□□□□ -0.73
CRLF3-202ENST00000577725 FOXQ1Q9C009 403 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 CNGB3Q9NQW8 809 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 MRPL17Q9NRX2 175 aaKnown RBP10.49□□□□□ -0.73
CRLF3-202ENST00000577725 ASNSD1Q9NWL6 643 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 GPATCH2LQ9NWQ4 482 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 GMIPQ9P107 970 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 CALCOCO1Q9P1Z2 691 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 NAALADL1Q9UQQ1 740 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 PCDHA3Q9Y5H8 950 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 NBEAQ8NFP9 2946 aa10.49□□□□□ -0.73
CRLF3-202ENST00000577725 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.48□□□□□ -0.73
CRLF3-202ENST00000577725 A0A1W2PQH9 124 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 SLC38A8A6NNN8 435 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 TEX28O15482 410 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 PSTPIP1O43586 416 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 LILRB3O75022 631 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 TRUB2O95900 331 aaKnown RBP10.48□□□□□ -0.73
CRLF3-202ENST00000577725 FYNP06241 537 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 CTSAP10619 480 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 PYGMP11217 842 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 PRLRP16471 622 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 ATF6P18850 670 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 SCNN1AP37088 669 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 RWDD2BP57060 319 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 SLC25A11Q02978 314 aaKnown RBP10.48□□□□□ -0.73
CRLF3-202ENST00000577725 PDAP1Q13442 181 aaKnown RBP10.48□□□□□ -0.73
CRLF3-202ENST00000577725 NAA30Q147X3 362 aaPredicted RBP10.48□□□□□ -0.73
CRLF3-202ENST00000577725 DCAF6Q58WW2 860 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 ZFYVE27Q5T4F4 411 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 SEL1L2Q5TEA6 688 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 CCDC181Q5TID7 509 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 SYPL2Q5VXT5 272 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 SCYL2Q6P3W7 929 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 TMC7Q7Z402 723 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 ANKS1BQ7Z6G8 1248 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 SCD5Q86SK9 330 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 RHOT1Q8IXI2 618 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 NUP93Q8N1F7 819 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 SLC7A14Q8TBB6 771 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 FNIP1Q8TF40 1166 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 ZCCHC14Q8WYQ9 949 aaKnown RBP10.48□□□□□ -0.73
CRLF3-202ENST00000577725 SLC2A13Q96QE2 648 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 HERPUD2Q9BSE4 406 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 DDX23Q9BUQ8 820 aaKnown RBP10.48□□□□□ -0.73
CRLF3-202ENST00000577725 NMUR1Q9HB89 426 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 CYP4F11Q9HBI6 524 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 AFF4Q9UHB7 1163 aaKnown RBP10.48□□□□□ -0.73
CRLF3-202ENST00000577725 MAGED2Q9UNF1 606 aaPredicted RBP10.48□□□□□ -0.73
CRLF3-202ENST00000577725 YIPF1Q9Y548 306 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 USP3Q9Y6I4 520 aa10.48□□□□□ -0.73
CRLF3-202ENST00000577725 BPTFQ12830 3046 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 TCRBV7S2A1N4TA0A589 114 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 CCDC66A2RUB6 948 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 CARNS1A5YM72 827 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 CAPN9O14815 690 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 CLASP2O75122 1294 aaKnown RBP10.47□□□□□ -0.73
CRLF3-202ENST00000577725 TADA3O75528 432 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 RNF8O76064 485 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 ABLIM3O94929 683 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 CNPP09543 421 aaKnown RBP10.47□□□□□ -0.73
CRLF3-202ENST00000577725 NCAM1P13591 858 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 MATKP42679 507 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 PTPN9P43378 593 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 LIMK1P53667 647 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 HDAC4P56524 1084 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 YWHAGP61981 247 aaKnown RBP eCLIP10.47□□□□□ -0.73
CRLF3-202ENST00000577725 YWHAZP63104 245 aaKnown RBP10.47□□□□□ -0.73
CRLF3-202ENST00000577725 MRPS25P82663 173 aaKnown RBP10.47□□□□□ -0.73
CRLF3-202ENST00000577725 CKAP4Q07065 602 aaKnown RBP10.47□□□□□ -0.73
CRLF3-202ENST00000577725 SMARCB1Q12824 385 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 TUBB2AQ13885 445 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 RAB33AQ14088 237 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 SMC1AQ14683 1233 aaKnown RBP10.47□□□□□ -0.73
CRLF3-202ENST00000577725 KCTD19Q17RG1 926 aaPredicted RBP10.47□□□□□ -0.73
CRLF3-202ENST00000577725 KCNT1Q5JUK3 1230 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 TEX35Q5T0J7 233 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 BSPRYQ5W0U4 402 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 PM20D1Q6GTS8 502 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 CYP4V2Q6ZWL3 525 aaPredicted RBP10.47□□□□□ -0.73
CRLF3-202ENST00000577725 CCDC50Q8IVM0 306 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 SLC44A3Q8N4M1 653 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 MRPL43Q8N983 215 aaKnown RBP10.47□□□□□ -0.73
CRLF3-202ENST00000577725 C2orf15Q8WU43 125 aaKnown RBP10.47□□□□□ -0.73
CRLF3-202ENST00000577725 RSAD2Q8WXG1 361 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 RAPGEF5Q92565 580 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 HSPH1Q92598 858 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 FBXO32Q969P5 355 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 SHDQ96IW2 340 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 KLHL5Q96PQ7 755 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 TUBB2BQ9BVA1 445 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 AP1M1Q9BXS5 423 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 OXCT2Q9BYC2 517 aaPredicted RBP10.47□□□□□ -0.73
CRLF3-202ENST00000577725 FAM126AQ9BYI3 521 aaPredicted RBP10.47□□□□□ -0.73
CRLF3-202ENST00000577725 MAGEB5Q9BZ81 275 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 POPDC2Q9HBU9 364 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 RXFP1Q9HBX9 757 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 PNPLA8Q9NP80 782 aa10.47□□□□□ -0.73
CRLF3-202ENST00000577725 TMPRSS4Q9NRS4 437 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms