RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SLC7A9P82251 487 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 RING1Q06587 406 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 MTA1Q13330 715 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 DCAF6Q58WW2 860 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 ATAT1Q5SQI0 421 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 N4BP2L1Q5TBK1 243 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 C11orf63Q6NUN7 778 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 UNQ6494/PRO21346Q6UXR6 183 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 PDZD4Q76G19 769 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 GRASPQ7Z6J2 395 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 ARFGAP1Q8N6T3 406 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 SHKBP1Q8TBC3 707 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 SMG7Q92540 1137 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 FAM149B1Q96BN6 582 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 SLC39A13Q96H72 371 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 MCEEQ96PE7 176 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 ADAM33Q9BZ11 813 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 TRIM7Q9C029 511 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 TBC1D17Q9HA65 648 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 HCFC1R1Q9NWW0 138 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 IGSF9Q9P2J2 1179 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 ANAPC7Q9UJX3 599 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 STAP1Q9ULZ2 295 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 SIT1Q9Y3P8 196 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 BPTFQ12830 3046 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 NBEAQ8NFP9 2946 aa11.6□□□□□ -0.55
CDK5RAP3-204ENST00000577664 CAPN9O14815 690 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 BUB1BO60566 1050 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 LRP3O75074 770 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 GJB6O95452 261 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 IGLV3-27P01718 113 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 TUBB4AP04350 444 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 DCNP07585 359 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 GLULP15104 373 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 SDC4P31431 198 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 CXCR3P49682 368 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 AIF1P55008 147 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 SLC5A9Q2M3M2 681 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 ARHGAP29Q52LW3 1261 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 ACBD5Q5T8D3 534 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 LRRC38Q5VT99 294 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 OTUD1Q5VV17 481 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 TMC5Q6UXY8 1006 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 PHLDB2Q86SQ0 1253 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 ZSCAN30Q86W11 494 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 PSTKQ8IV42 348 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 SYCE1Q8N0S2 351 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 EMC1Q8N766 993 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 C12orf76Q8N812 135 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 TRIM58Q8NG06 486 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 RNF139Q8WU17 664 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 MRPS31Q92665 395 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 AZIN2Q96A70 460 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 ACSF2Q96CM8 615 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 CFAP57Q96MR6 1250 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 SLC46A2Q9BY10 475 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 RNF38Q9H0F5 515 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 TASP1Q9H6P5 420 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 TRPV4Q9HBA0 871 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 LZTFL1Q9NQ48 299 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 GDE1Q9NZC3 331 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 TRIM10Q9UDY6 481 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 DNMT3LQ9UJW3 386 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 GUCA1BQ9UMX6 200 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 TLR6Q9Y2C9 796 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 HBS1LQ9Y450 684 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 ALG6Q9Y672 507 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 ZFP37Q9Y6Q3 630 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 LOC400499M0QZD8 3231 aa11.59□□□□□ -0.55
CDK5RAP3-204ENST00000577664 OBSL1O75147 1896 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 A0A1W2PRU2 124 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 GRID2IPA4D2P6 1211 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TMEM8BA6NDV4 472 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 USP27XA6NNY8 438 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 KCNU1A8MYU2 1149 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 C1QTNF9BB2RNN3 333 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 STK25O00506 426 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NRG2O14511 850 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 IRAK2O43187 625 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 COCHO43405 550 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 LRCH4O75427 683 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 GRAP2O75791 330 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 RNF8O76064 485 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ZIC2O95409 532 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TRUB2O95900 331 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 C1QTNF9P0C862 333 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 GBP1P32455 592 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NOP2P46087 812 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 HDAC4P56524 1084 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 RNASE9P60153 205 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 COG7P83436 770 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PPP2R5DQ14738 602 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TRIP4Q15650 581 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 BRMS1LQ5PSV4 323 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 RARS2Q5T160 578 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 POTEHQ6S545 545 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DQX1Q8TE96 717 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 EDEM1Q92611 657 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CD101Q93033 1021 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms