RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 FOXJ2Q9P0K8 574 aa15.31■□□□□ 0.04
SLC12A4-216ENST00000576377 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 PRAMEF33A0A0G2JMD5 474 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 CPED1A4D0V7 1026 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 CLDN3O15551 220 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 PRAMEF10O60809 474 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 TCEA3O75764 348 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 MATR3P43243 847 aaKnown RBP eCLIP15.3■□□□□ 0.042e-11■■□□□ 11.5
SLC12A4-216ENST00000576377 NOP14P78316 857 aaKnown RBP15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 SRSF11Q05519 484 aaKnown RBP15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 ZNF177Q13360 481 aaPredicted RBP15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 MRPL49Q13405 166 aaKnown RBP15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 TMEM132DQ14C87 1099 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 PERM1Q5SV97 790 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 CREB3L3Q68CJ9 461 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 HTR3DQ70Z44 454 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 RAB11FIP2Q7L804 512 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 DAW1Q8N136 415 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 GANCQ8TET4 914 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 JPH3Q8WXH2 748 aaPredicted RBP15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 LSG1Q9H089 658 aaKnown RBP15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 EPB41L5Q9HCM4 733 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 NLGN3Q9NZ94 848 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 PISDQ9UG56 409 aa15.3■□□□□ 0.04
SLC12A4-216ENST00000576377 SLC16A4O15374 487 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 NVLO15381 856 aaKnown RBP15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 NEBLO76041 1014 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 PPP2CBP62714 309 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 PPP2CAP67775 309 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 SSRP1Q08945 709 aaKnown RBP15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 NAPEPLDQ6IQ20 393 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 SPNS3Q6ZMD2 512 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 TMPRSS9Q7Z410 1059 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 ANKS1BQ7Z6G8 1248 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 ZNF276Q8N554 614 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 TEX19Q8NA77 164 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 CPT1CQ8TCG5 803 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 PIWIL1Q96J94 861 aaKnown RBP15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 LURAP1Q96LR2 239 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 AIFM3Q96NN9 605 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 SLITRK1Q96PX8 696 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 USP29Q9HBJ7 922 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 PRSS16Q9NQE7 514 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 KMT5AQ9NQR1 393 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 CLEC4EQ9ULY5 219 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 CROCCQ5TZA2 2017 aa15.29■□□□□ 0.04
SLC12A4-216ENST00000576377 F8VP50 259 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 K7ESM1 405 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 PIAS2O75928 621 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 ALPPL2P10696 532 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 ANXA13P27216 316 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 CCR5P51681 352 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 PSMC1P62191 440 aaKnown RBP15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 SV2CQ496J9 727 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 EARS2Q5JPH6 523 aaKnown RBP15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 HECTD3Q5T447 861 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 FAM171BQ6P995 826 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 VSTM1Q6UX27 236 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 OR2T34Q8NGX1 318 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 PRR7Q8TB68 274 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 HEXIM2Q96MH2 286 aaKnown RBP15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 PABPC3Q9H361 631 aaKnown RBP15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 ZSWIM6Q9HCJ5 1215 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 PREBQ9HCU5 417 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 TUFT1Q9NNX1 390 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 TMEM30AQ9NV96 361 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 FBXL12Q9NXK8 326 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 CA5BQ9Y2D0 317 aa15.28■□□□□ 0.04
SLC12A4-216ENST00000576377 LRRC72A6NJI9 287 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 LUC7L3O95232 432 aaKnown RBP15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 ITIH1P19827 911 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 TXKP42681 527 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 HARS2P49590 506 aaKnown RBP15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 CACNA2D1P54289 1103 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 NECTIN1Q15223 517 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 TDRD10Q5VZ19 366 aaKnown RBP15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 ZNF776Q68DI1 518 aaPredicted RBP15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 PIK3AP1Q6ZUJ8 805 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 USP30Q70CQ3 517 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 SKAP1Q86WV1 359 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 CYB5D2Q8WUJ1 264 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 CEP295NLQ96MC4 621 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 TSPAN18Q96SJ8 248 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 NEUROG2Q9H2A3 272 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 SYNDIG1Q9H7V2 258 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 PRDM8Q9NQV8 689 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 DPP3Q9NY33 737 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 EHD2Q9NZN4 543 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 MAGEC2Q9UBF1 373 aaPredicted RBP15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 KCNJ14Q9UNX9 436 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 ENTPD4Q9Y227 616 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 NCKAP1Q9Y2A7 1128 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 PCDHB11Q9Y5F2 797 aa15.27■□□□□ 0.04
SLC12A4-216ENST00000576377 STAB1Q9NY15 2570 aa15.27■□□□□ 0.03
SLC12A4-216ENST00000576377 ATRQ13535 2644 aa15.26■□□□□ 0.03
SLC12A4-216ENST00000576377 FBN1P35555 2871 aaKnown RBP15.26■□□□□ 0.03
SLC12A4-216ENST00000576377 A0A1W2PP55 124 aa15.26■□□□□ 0.03
SLC12A4-216ENST00000576377 TTLL8A6PVC2 850 aa15.26■□□□□ 0.03
SLC12A4-216ENST00000576377 AGRPO00253 132 aa15.26■□□□□ 0.03
SLC12A4-216ENST00000576377 PENKP01210 267 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms