RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 PDXKO00764 312 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 ZSCAN22P10073 491 aaPredicted RBP12.64□□□□□ -0.39
CAPN3-220ENST00000569827 ACADMP11310 421 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 NR2F2P24468 414 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 ACSL1P33121 698 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 SGSHP51688 502 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 CLDN6P56747 220 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 ENPP2Q13822 863 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 HNRNPDQ14103 355 aaKnown RBP12.64□□□□□ -0.39
CAPN3-220ENST00000569827 KCNT1Q5JUK3 1230 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 RSRC2Q7L4I2 434 aaKnown RBP12.64□□□□□ -0.39
CAPN3-220ENST00000569827 PIGZQ86VD9 579 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 ZC3H3Q8IXZ2 948 aaKnown RBP12.64□□□□□ -0.39
CAPN3-220ENST00000569827 RBBP8NLQ8NC74 664 aaPredicted RBP12.64□□□□□ -0.39
CAPN3-220ENST00000569827 WFDC5Q8TCV5 224 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 RHBDD1Q8TEB9 315 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 UCMAQ8WVF2 138 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 BBC3Q96PG8 261 aaPredicted RBP12.64□□□□□ -0.39
CAPN3-220ENST00000569827 ULBP1Q9BZM6 244 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 IMPG2Q9BZV3 1241 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 MARCH2Q9P0N8 246 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 APOBEC2Q9Y235 224 aaKnown RBP12.64□□□□□ -0.39
CAPN3-220ENST00000569827 FRMD4BQ9Y2L6 1034 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 SNX11Q9Y5W9 270 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 USP3Q9Y6I4 520 aa12.64□□□□□ -0.39
CAPN3-220ENST00000569827 SETXQ7Z333 2677 aaKnown RBP12.63□□□□□ -0.39
CAPN3-220ENST00000569827 MSI1O43347 362 aaKnown RBP12.63□□□□□ -0.39
CAPN3-220ENST00000569827 CER1O95813 267 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 SLFN14P0C7P3 912 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 PFKFB1P16118 471 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 HOXD9P28356 352 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-220ENST00000569827 CHKAP35790 457 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 YWHAGP61981 247 aaKnown RBP eCLIP12.63□□□□□ -0.39
CAPN3-220ENST00000569827 ARID5AQ03989 594 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 KIF19Q2TAC6 998 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 FNDC3BQ53EP0 1204 aaKnown RBP12.63□□□□□ -0.39
CAPN3-220ENST00000569827 METTL3Q86U44 580 aaKnown RBP12.63□□□□□ -0.39
CAPN3-220ENST00000569827 FMNL3Q8IVF7 1028 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 FAM186BQ8IYM0 893 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 SLC4A11Q8NBS3 891 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 CADM4Q8NFZ8 388 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 C1orf216Q8TAB5 229 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 BAHD1Q8TBE0 780 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-220ENST00000569827 EDEM1Q92611 657 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 TATDN2Q93075 761 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 LRIG1Q96JA1 1093 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 ZDHHC5Q9C0B5 715 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 LHX5Q9H2C1 402 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 CYP3A43Q9HB55 503 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 PNPLA8Q9NP80 782 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 SFMBT1Q9UHJ3 866 aa12.63□□□□□ -0.39
CAPN3-220ENST00000569827 PIK3R2O00459 728 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 IKBKBO14920 756 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 CALUO43852 315 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-220ENST00000569827 FSBPO95073 299 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 ZIC2O95409 532 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-220ENST00000569827 CYBBP04839 570 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 TRIM21P19474 475 aaKnown RBP12.62□□□□□ -0.39
CAPN3-220ENST00000569827 HLA-FP30511 346 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 NUMBP49757 651 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 PSEN1P49768 467 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 TKTL1P51854 596 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 RAD23BP54727 409 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 COG7P83436 770 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 GOLGA7BQ2TAP0 167 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 PRAMEF14Q5SWL7 426 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 CHST9Q7L1S5 443 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 BHLHA9Q7RTU4 235 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 TADA2BQ86TJ2 420 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 NUP58Q9BVL2 599 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 DCLK3Q9C098 648 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 ABCB8Q9NUT2 735 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 CLIC5Q9NZA1 410 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 ZNF510Q9Y2H8 683 aa12.62□□□□□ -0.39
CAPN3-220ENST00000569827 HELZ2Q9BYK8 2649 aaKnown RBP12.62□□□□□ -0.39
CAPN3-220ENST00000569827 CBX4O00257 560 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 KRT13P13646 458 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 OXTRP30559 389 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 CYP4F3Q08477 520 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 PDE4CQ08493 712 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 ADIGQ0VDE8 80 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 PTPRNQ16849 979 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 RFWD3Q6PCD5 774 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 GLRX5Q86SX6 157 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 SMYD4Q8IYR2 804 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-220ENST00000569827 CPXM2Q8N436 756 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 OR2T3Q8NH03 318 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 UBA3Q8TBC4 463 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 BIRC7Q96CA5 298 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 TM9SF3Q9HD45 589 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 CISHQ9NSE2 258 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 STRIP2Q9ULQ0 834 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 TRAF3IP3Q9Y228 551 aa12.61□□□□□ -0.39
CAPN3-220ENST00000569827 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-220ENST00000569827 GOLGA6L7A0A1B0GV03 622 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 TRABD2BA6NFA1 517 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 FAM47DPA6NHR8 397 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 H0Y8X5 98 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 SEMA4FO95754 770 aa12.6□□□□□ -0.39
CAPN3-220ENST00000569827 CALCAP01258 141 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms