RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 PCIF1Q9H4Z3 704 aa9.11□□□□□ -0.95
SMG1-216ENST00000569122 CPNE5Q9HCH3 593 aa9.11□□□□□ -0.95
SMG1-216ENST00000569122 AASDHPPTQ9NRN7 309 aa9.11□□□□□ -0.95
SMG1-216ENST00000569122 EVA1BQ9NVM1 165 aa9.11□□□□□ -0.95
SMG1-216ENST00000569122 STK17AQ9UEE5 414 aa9.11□□□□□ -0.95
SMG1-216ENST00000569122 CCDC39Q9UFE4 941 aa9.11□□□□□ -0.95
SMG1-216ENST00000569122 PCDHA5Q9Y5H7 936 aa9.11□□□□□ -0.95
SMG1-216ENST00000569122 COL6A6A6NMZ7 2263 aa9.11□□□□□ -0.95
SMG1-216ENST00000569122 ATP5BP06576 529 aaKnown RBP9.1□□□□□ -0.95
SMG1-216ENST00000569122 RARGP13631 454 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 EPHA8P29322 1005 aaPredicted RBP9.1□□□□□ -0.95
SMG1-216ENST00000569122 INSM1Q01101 510 aaPredicted RBP9.1□□□□□ -0.95
SMG1-216ENST00000569122 KCNA1Q09470 495 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 OVGP1Q12889 678 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 KCNT1Q5JUK3 1230 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 ZNF776Q68DI1 518 aaPredicted RBP9.1□□□□□ -0.95
SMG1-216ENST00000569122 ATG14Q6ZNE5 492 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 SV2BQ7L1I2 683 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 CACUL1Q86Y37 369 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 ZNF557Q8N988 423 aaPredicted RBP9.1□□□□□ -0.95
SMG1-216ENST00000569122 DDI1Q8WTU0 396 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 DEPDC7Q96QD5 511 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 SEMA4CQ9C0C4 833 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 DPEP3Q9H4B8 488 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 POLR1BQ9H9Y6 1135 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 CSNK1G1Q9HCP0 422 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 PNPLA8Q9NP80 782 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 TMEM30AQ9NV96 361 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 STRIP2Q9ULQ0 834 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 SLCO1B1Q9Y6L6 691 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 CABIN1Q9Y6J0 2220 aa9.1□□□□□ -0.95
SMG1-216ENST00000569122 MYO18AQ92614 2054 aaKnown RBP9.09□□□□□ -0.95
SMG1-216ENST00000569122 OBSL1O75147 1896 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 MGAQ8IWI9 3026 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 K7ENP7 123 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 TLR4O00206 839 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 PHACTR2O75167 634 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 STC2O76061 302 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 CST3P01034 146 aaPredicted RBP9.09□□□□□ -0.95
SMG1-216ENST00000569122 IGHV4-34P06331 123 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 FAM200BP0CF97 657 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 DLATP10515 647 aaKnown RBP9.09□□□□□ -0.95
SMG1-216ENST00000569122 RBMS1P29558 406 aaKnown RBP9.09□□□□□ -0.95
SMG1-216ENST00000569122 NUDT1P36639 197 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 CCR5P51681 352 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 CLDN6P56747 220 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 RPS14P62263 151 aaKnown RBP9.09□□□□□ -0.95
SMG1-216ENST00000569122 ST3GAL1Q11201 340 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 ZNF211Q13398 564 aaPredicted RBP9.09□□□□□ -0.95
SMG1-216ENST00000569122 MPPE1Q53F39 396 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 COLEC12Q5KU26 742 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 SCARA3Q6AZY7 606 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 INO80CQ6PI98 192 aaPredicted RBP9.09□□□□□ -0.95
SMG1-216ENST00000569122 LAYNQ6UX15 382 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 KDM7AQ6ZMT4 941 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 IQCHQ86VS3 1027 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 ARHGAP18Q8N392 663 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 CPXM2Q8N436 756 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 ZSWIM2Q8NEG5 633 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 OR2T34Q8NGX1 318 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 SLC6A18Q96N87 628 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 IKZF4Q9H2S9 585 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 TMEM245Q9H330 911 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 VRTNQ9H8Y1 702 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 KRT82Q9NSB4 513 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.09□□□□□ -0.95
SMG1-216ENST00000569122 FBXL12Q9NXK8 326 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 CLIC5Q9NZA1 410 aa9.09□□□□□ -0.95
SMG1-216ENST00000569122 ATMQ13315 3056 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 FAM47DPA6NHR8 397 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 CBX4O00257 560 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 RIOK3O14730 519 aaKnown RBP9.08□□□□□ -0.96
SMG1-216ENST00000569122 STX6O43752 255 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 CLSTN1O94985 981 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 DLDP09622 509 aaKnown RBP9.08□□□□□ -0.96
SMG1-216ENST00000569122 IDEP14735 1019 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 CORO1AP31146 461 aaKnown RBP9.08□□□□□ -0.96
SMG1-216ENST00000569122 TXLNAP40222 546 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 DUSP3P51452 185 aaPredicted RBP9.08□□□□□ -0.96
SMG1-216ENST00000569122 AP3M2P53677 418 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 GALCP54803 685 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 MAP3K7CLP57077 242 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 NXPH1P58417 271 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 ST8SIA6P61647 398 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 SNRPFP62306 86 aaKnown RBP9.08□□□□□ -0.96
SMG1-216ENST00000569122 GABREP78334 506 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 DAB2P98082 770 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 SHBQ15464 509 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 BMT2Q1RMZ1 405 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 PRAMEF14Q5SWL7 426 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 SFMBT2Q5VUG0 894 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 IGF2-ASQ6U949 168 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 CCDC81Q6ZN84 652 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 PAQR9Q6ZVX9 377 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 UNC93AQ86WB7 457 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 FUKQ8N0W3 1084 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 AHI1Q8N157 1196 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 MFSD2AQ8NA29 543 aa9.08□□□□□ -0.96
SMG1-216ENST00000569122 RBBP8NLQ8NC74 664 aaPredicted RBP9.08□□□□□ -0.96
SMG1-216ENST00000569122 SORCS1Q8WY21 1168 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms