RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 HECTD3Q5T447 861 aa10.23□□□□□ -0.77
CAPN3-216ENST00000567071 HAUS3Q68CZ6 603 aa10.23□□□□□ -0.77
CAPN3-216ENST00000567071 TMC6Q7Z403 805 aa10.23□□□□□ -0.77
CAPN3-216ENST00000567071 ZC3H18Q86VM9 953 aaKnown RBP10.23□□□□□ -0.77
CAPN3-216ENST00000567071 PDCL2Q8N4E4 241 aa10.23□□□□□ -0.77
CAPN3-216ENST00000567071 WDR36Q8NI36 951 aaKnown RBP10.23□□□□□ -0.77
CAPN3-216ENST00000567071 GANCQ8TET4 914 aa10.23□□□□□ -0.77
CAPN3-216ENST00000567071 SPATA32Q96LK8 384 aa10.23□□□□□ -0.77
CAPN3-216ENST00000567071 OSBPL2Q9H1P3 480 aa10.23□□□□□ -0.77
CAPN3-216ENST00000567071 DPP3Q9NY33 737 aa10.23□□□□□ -0.77
CAPN3-216ENST00000567071 LRWD1Q9UFC0 647 aa10.23□□□□□ -0.77
CAPN3-216ENST00000567071 MYH11P35749 1972 aa10.23□□□□□ -0.77
CAPN3-216ENST00000567071 ABCA2Q9BZC7 2435 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 A0A087X0B3 334 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 A0A1B0GVM2 712 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 LRRC72A6NJI9 287 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 TLR4O00206 839 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 COCHO43405 550 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 WNT1P04628 370 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 IGHV4-34P06331 123 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 ADRB2P07550 413 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 ITGA2BP08514 1039 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 CISD3P0C7P0 127 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 BDNFP23560 247 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 DCTP40126 519 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 NASPP49321 788 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-216ENST00000567071 LIG4P49917 911 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 NXPH1P58417 271 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 IFRD2Q12894 506 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-216ENST00000567071 KCNAB2Q13303 367 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 EIF4HQ15056 248 aaKnown RBP10.22□□□□□ -0.77
CAPN3-216ENST00000567071 MANEAQ5SRI9 462 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 ATL3Q6DD88 541 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 CLEC17AQ6ZS10 378 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 C14orf80Q86SX3 495 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 BHMTQ93088 406 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 ATXN7L3BQ96GX2 97 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 ASB7Q9H672 318 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.22□□□□□ -0.77
CAPN3-216ENST00000567071 TUBD1Q9UJT1 453 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 CFAP45Q9UL16 551 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 SLC27A6Q9Y2P4 619 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 C2CD2Q9Y426 696 aa10.22□□□□□ -0.77
CAPN3-216ENST00000567071 ZFC3H1O60293 1989 aaKnown RBP10.22□□□□□ -0.77
CAPN3-216ENST00000567071 KIF26BQ2KJY2 2108 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 H0YCG3 227 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 GOLGA6L22H0YM25 854 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 TRIM38O00635 465 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 HNRNPDLO14979 420 aaKnown RBP10.21□□□□□ -0.77
CAPN3-216ENST00000567071 LZTS3O60299 673 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-216ENST00000567071 YEATS4O95619 227 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 CKMT1AP12532 417 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 ACO1P21399 889 aaKnown RBP10.21□□□□□ -0.77
CAPN3-216ENST00000567071 PRKCHP24723 683 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 CYP27A1Q02318 531 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 NAA30Q147X3 362 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-216ENST00000567071 CLCA4Q14CN2 919 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 NFKBIBQ15653 356 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 ANKS1BQ7Z6G8 1248 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 JAMLQ86YT9 394 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 OR4C6Q8NH72 309 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 OVCA2Q8WZ82 227 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 GOLGA1Q92805 767 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 FBXO32Q969P5 355 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 MIB2Q96AX9 1013 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 SERAC1Q96JX3 654 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 PKMYT1Q99640 499 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 ORAI3Q9BRQ5 295 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 SLC4A5Q9BY07 1137 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 CIPCQ9C0C6 399 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 SCAND2PQ9GZW5 306 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-216ENST00000567071 KDM4CQ9H3R0 1056 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 USP29Q9HBJ7 922 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 TPX2Q9ULW0 747 aaKnown RBP10.21□□□□□ -0.77
CAPN3-216ENST00000567071 L1RE1Q9UN81 338 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 PCDHGA4Q9Y5G9 962 aa10.21□□□□□ -0.77
CAPN3-216ENST00000567071 CSMD1Q96PZ7 3565 aa10.21□□□□□ -0.78
CAPN3-216ENST00000567071 CCDC187A0A096LP49 1063 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 SPTLC2O15270 562 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 SDC3O75056 442 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 GADD45BO75293 160 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-216ENST00000567071 VPS4BO75351 444 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 RTN3O95197 1032 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-216ENST00000567071 OR52Z1P0C646 297 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 YWHAQP27348 245 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 GRNP28799 593 aaKnown RBP10.2□□□□□ -0.78
CAPN3-216ENST00000567071 CCT6AP40227 531 aaKnown RBP10.2□□□□□ -0.78
CAPN3-216ENST00000567071 ME1P48163 572 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 CD97P48960 835 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 CAMK2GQ13555 558 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-216ENST00000567071 BORAQ6PGQ7 559 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 RBM44Q6ZP01 1051 aaKnown RBP10.2□□□□□ -0.78
CAPN3-216ENST00000567071 HTR3DQ70Z44 454 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 MAMDC2Q7Z304 686 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-216ENST00000567071 ADGRG4Q8IZF6 3080 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 ADGRF2Q8IZF7 708 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 LINC00301Q8NCQ3 95 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 MYLPFQ96A32 169 aa10.2□□□□□ -0.78
CAPN3-216ENST00000567071 RNF25Q96BH1 459 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-216ENST00000567071 SYT15Q9BQS2 421 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms