RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 CATSPERBQ9H7T0 1116 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 GDF3Q9NR23 364 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 FAM114A2Q9NRY5 505 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 RBM12Q9NTZ6 932 aaKnown RBP10.19□□□□□ -0.78
SF3B3-207ENST00000566095 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.19□□□□□ -0.78
SF3B3-207ENST00000566095 COX16Q9P0S2 106 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 PCSK1NQ9UHG2 260 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 FZD10Q9ULW2 581 aa10.19□□□□□ -0.78
SF3B3-207ENST00000566095 PACSIN2Q9UNF0 486 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-207ENST00000566095 DRG1Q9Y295 367 aaKnown RBP10.19□□□□□ -0.78
SF3B3-207ENST00000566095 MTCL1Q9Y4B5 1905 aaKnown RBP10.18□□□□□ -0.78
SF3B3-207ENST00000566095 CCDC195A0A1B0GUA6 201 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 SLC12A8A0AV02 714 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 FGF10O15520 208 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-207ENST00000566095 PAPLNO95428 1278 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 IGLV3-25P01717 112 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 F11P03951 625 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 FYNP06241 537 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 CKMP06732 381 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 RARAP10276 462 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 PYGMP11217 842 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 MYL4P12829 197 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 HDCP19113 662 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 KDELR1P24390 212 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 SERPINB6P35237 376 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 ADRA1BP35368 520 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 HCAR3P49019 387 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 CAV1Q03135 178 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 GPR153Q6NV75 609 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 TMEM184AQ6ZMB5 413 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 MIB1Q86YT6 1006 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 CCDC117Q8IWD4 279 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-207ENST00000566095 CNPY4Q8N129 248 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 KIAA1958Q8N8K9 716 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 BBOF1Q8ND07 529 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 VN1R2Q8NFZ6 395 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 NDRG1Q92597 394 aaKnown RBP10.18□□□□□ -0.78
SF3B3-207ENST00000566095 KRT35Q92764 455 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 AZIN2Q96A70 460 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 C1orf74Q96LT6 269 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 RIPOR3Q96MK2 946 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 PSMB7Q99436 277 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 SNRNP25Q9BV90 132 aaKnown RBP10.18□□□□□ -0.78
SF3B3-207ENST00000566095 OSBPL8Q9BZF1 889 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 TKTL2Q9H0I9 626 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 OSBPL2Q9H1P3 480 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 ACBD3Q9H3P7 528 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 GOLPH3Q9H4A6 298 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 DHX35Q9H5Z1 703 aaKnown RBP10.18□□□□□ -0.78
SF3B3-207ENST00000566095 KIF9Q9HAQ2 790 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 NMUR1Q9HB89 426 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 TRPC7Q9HCX4 862 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 PIGVQ9NUD9 493 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 ARHGEF38Q9NXL2 777 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 UTP11Q9Y3A2 253 aaKnown RBP10.18□□□□□ -0.78
SF3B3-207ENST00000566095 MRPS23Q9Y3D9 190 aaKnown RBP10.18□□□□□ -0.78
SF3B3-207ENST00000566095 RAD54BQ9Y620 910 aa10.18□□□□□ -0.78
SF3B3-207ENST00000566095 COL4A4P53420 1690 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-207ENST00000566095 EEF2KO00418 725 aaKnown RBP10.17□□□□□ -0.78
SF3B3-207ENST00000566095 PER2O15055 1255 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 GAS8O95995 478 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 OAS1P00973 400 aaKnown RBP10.17□□□□□ -0.78
SF3B3-207ENST00000566095 RHOP08100 348 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 POU3F3P20264 500 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-207ENST00000566095 TGM2P21980 687 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 L1CAMP32004 1257 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 TAS2R40P59535 323 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 TPI1P60174 286 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 SLC7A9P82251 487 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 NRG1Q02297 640 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-207ENST00000566095 CBLBQ13191 982 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 SMTNL2Q2TAL5 461 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 PPP6R3Q5H9R7 873 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-207ENST00000566095 RABGAP1LQ5R372 815 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 ATAT1Q5SQI0 421 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 TTC39BQ5VTQ0 682 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-207ENST00000566095 TRNP1Q6NT89 227 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 FBXO38Q6PIJ6 1188 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 C4orf22Q6V702 233 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 SPOCD1Q6ZMY3 1216 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 BBS12Q6ZW61 710 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 RFX6Q8HWS3 928 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 MREGQ8N565 214 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 ZNF557Q8N988 423 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-207ENST00000566095 ATL2Q8NHH9 583 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 NKD2Q969F2 451 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-207ENST00000566095 CAVIN3Q969G5 261 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 E2F7Q96AV8 911 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 NECTIN4Q96NY8 510 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 LRRC1Q9BTT6 524 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 PHACTR1Q9C0D0 580 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 TASP1Q9H6P5 420 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 SH3BP1Q9Y3L3 701 aa10.17□□□□□ -0.78
SF3B3-207ENST00000566095 ZFP37Q9Y6Q3 630 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-207ENST00000566095 GREB1Q4ZG55 1949 aa10.16□□□□□ -0.78
SF3B3-207ENST00000566095 KCNU1A8MYU2 1149 aa10.16□□□□□ -0.78
SF3B3-207ENST00000566095 F5H5T6 163 aa10.16□□□□□ -0.78
SF3B3-207ENST00000566095 SLC9A3R1O14745 358 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-207ENST00000566095 APOL1O14791 398 aa10.16□□□□□ -0.78
SF3B3-207ENST00000566095 NCAM2O15394 837 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms