RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 ZNF556Q9HAH1 456 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 BLOC1S4Q9NUP1 217 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 C6orf203Q9P0P8 240 aaPredicted RBP6.69□□□□□ -1.34
LINC01043-201ENST00000565936 VANGL2Q9ULK5 521 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 NALCNQ8IZF0 1738 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 PLIN4Q96Q06 1357 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 ERI2A8K979 691 aaKnown RBP6.69□□□□□ -1.34
LINC01043-201ENST00000565936 SPTLC1O15269 473 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 EPB42P16452 691 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 GCKP35557 465 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 MAPK7Q13164 816 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 NFIL3Q16649 462 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 CDKAL1Q5VV42 579 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 LRRC8EQ6NSJ5 796 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 C16orf89Q6UX73 402 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.69□□□□□ -1.34
LINC01043-201ENST00000565936 TRMT11Q7Z4G4 463 aaKnown RBP6.69□□□□□ -1.34
LINC01043-201ENST00000565936 TFAP2DQ7Z6R9 452 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 MON1AQ86VX9 555 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 CATSPER1Q8NEC5 780 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 CDV3Q9UKY7 258 aaKnown RBP6.69□□□□□ -1.34
LINC01043-201ENST00000565936 TRIM16O95361 564 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 FAM107AO95990 144 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 MLNP12872 115 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 ITGB5P18084 799 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 PTPN7P35236 360 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 C21orf59P57076 290 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 KCNT1Q5JUK3 1230 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 KIAA1324Q6UXG2 1013 aaKnown RBP6.69□□□□□ -1.34
LINC01043-201ENST00000565936 SCUBE3Q8IX30 993 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 ETNPPLQ8TBG4 499 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 ABHD8Q96I13 439 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 C9orf72Q96LT7 481 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 SERPINB12Q96P63 405 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 ZYG11BQ9C0D3 744 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 ING2Q9H160 280 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 ARMC7Q9H6L4 198 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 CNGB3Q9NQW8 809 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 DCTN4Q9UJW0 460 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 TMEM150BA6NC51 233 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 KELP23276 732 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 PIK3CGP48736 1102 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 NAB1Q13506 487 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 SMAD1Q15797 465 aaKnown RBP6.69□□□□□ -1.34
LINC01043-201ENST00000565936 C1orf146Q5VVC0 180 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 TRIM68Q6AZZ1 485 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 GLT6D1Q7Z4J2 308 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 ACTRT1Q8TDG2 376 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 OR8D1Q8WZ84 308 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 GLMNQ92990 594 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 SPACA7Q96KW9 195 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 EIF2AQ9BY44 585 aaKnown RBP6.69□□□□□ -1.34
LINC01043-201ENST00000565936 PCDH9Q9HC56 1237 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 GPATCH2LQ9NWQ4 482 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 PADI3Q9ULW8 664 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 DTNAQ9Y4J8 743 aa6.69□□□□□ -1.34
LINC01043-201ENST00000565936 ADGRA2Q96PE1 1338 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 COL1A1P02452 1464 aaPredicted RBP6.68□□□□□ -1.34
LINC01043-201ENST00000565936 AFDNP55196 1824 aaKnown RBP6.68□□□□□ -1.34
LINC01043-201ENST00000565936 PLEKP08567 350 aaPredicted RBP6.68□□□□□ -1.34
LINC01043-201ENST00000565936 CLTBP09497 229 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 PSMA3P25788 255 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 SOAT1P35610 550 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 AP2B1P63010 937 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 BRMS1LQ5PSV4 323 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 RAD9BQ6WBX8 426 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 HTR3CQ8WXA8 447 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 HAS1Q92839 578 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 SLC35C1Q96A29 364 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 SERAC1Q96JX3 654 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 KCTD10Q9H3F6 313 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 CTNNAL1Q9UBT7 734 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 A0A1W2PQ67 120 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 SYNDIG1LA6NDD5 238 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 SIGLEC16A6NMB1 481 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 SLCO1B7G3V0H7 640 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 RAD51BO15315 384 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 MPOP05164 745 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 NFICP08651 508 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 CDH8P55286 799 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 SKOR1P84550 965 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 SPANXN3Q5MJ09 141 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 BEND6Q5SZJ8 279 aaPredicted RBP6.68□□□□□ -1.34
LINC01043-201ENST00000565936 DENND1BQ6P3S1 775 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 TPGS1Q6ZTW0 290 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 EMC1Q8N766 993 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 SMG7Q92540 1137 aaKnown RBP6.68□□□□□ -1.34
LINC01043-201ENST00000565936 HSD17B14Q9BPX1 270 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 GPR88Q9GZN0 384 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 ZDHHC4Q9NPG8 344 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 RGS18Q9NS28 235 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 KIAA1522Q9P206 1035 aaPredicted RBP6.68□□□□□ -1.34
LINC01043-201ENST00000565936 TMCO1Q9UM00 188 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 SNX5Q9Y5X3 404 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 ATRNL1Q5VV63 1379 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 RNF103-CHMP3A0A140T963 221 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 XPO1O14980 1071 aaKnown RBP6.68□□□□□ -1.34
LINC01043-201ENST00000565936 TPBGLP0DKB5 382 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 PRKAA2P54646 552 aa6.68□□□□□ -1.34
LINC01043-201ENST00000565936 CSE1LP55060 971 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms