RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 HIBCHQ6NVY1 386 aaPredicted RBP13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 VSIG1Q86XK7 387 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 RELL1Q8IUW5 271 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 KREMEN2Q8NCW0 462 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 ACTL9Q8TC94 416 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 FAM172AQ8WUF8 416 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 HSPH1Q92598 858 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 CENPIQ92674 756 aaPredicted RBP13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 FOXP3Q9BZS1 431 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 RAB6CQ9H0N0 254 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 ADAM7Q9H2U9 754 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 COMMD8Q9NX08 183 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 SLC27A5Q9Y2P5 690 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 YIPF1Q9Y548 306 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 INSL5Q9Y5Q6 135 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 A6NNZ2 444 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 RFXAPO00287 272 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 FBXO21O94952 628 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 RTN3O95197 1032 aaPredicted RBP13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 SEC24AO95486 1093 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 SHBGP04278 402 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 DESP17661 470 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 NR1D1P20393 614 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 VPS41P49754 854 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 EPHB3P54753 998 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 DPYSL3Q14195 570 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 PDK2Q15119 407 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 P3H1Q32P28 736 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 TUBB8Q3ZCM7 444 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 IZUMO3Q5VZ72 239 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 HOOK3Q86VS8 718 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 SIX6OS1Q8N1H7 587 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 TTC9BQ8N6N2 239 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 GLIS1Q8NBF1 620 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 ZMIZ2Q8NF64 920 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 CLEC4CQ8WTT0 213 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 SLC22A17Q8WUG5 538 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 HAUS1Q96CS2 278 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 KCNK16Q96T55 309 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 TTYH1Q9H313 450 aaPredicted RBP13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 FBXO44Q9H4M3 255 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 PRDM12Q9H4Q4 367 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 PCDH9Q9HC56 1237 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 ASB3Q9Y575 518 aa13.14□□□□□ -0.31
NSMCE1-208ENST00000565070 MYO7AQ13402 2215 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 DNALI1O14645 258 aaPredicted RBP13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 MDM4O15151 490 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 POU3F3P20264 500 aaPredicted RBP13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 HOXA9P31269 272 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 NRIP1P48552 1158 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 CDH6P55285 790 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 HDAC4P56524 1084 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 DYNLT1P63172 113 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 ATP11AP98196 1134 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 DDR2Q16832 855 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 CDO1Q16878 200 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 KRT71Q3SY84 523 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 RAB41Q5JT25 222 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 UBAP2Q5T6F2 1119 aaKnown RBP13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 CROCCP2Q86T23 111 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 PRUNE1Q86TP1 453 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 ITIH5Q86UX2 942 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 MAP7D3Q8IWC1 876 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 NUP93Q8N1F7 819 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 SCML4Q8N228 414 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 ELMOD1Q8N336 334 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 ZCCHC9Q8N567 271 aaKnown RBP13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 SLC7A14Q8TBB6 771 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 TMEM121Q9BTD3 319 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 CALN1Q9BXU9 219 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 CRISPLD1Q9H336 500 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 CDC42EP4Q9H3Q1 356 aaKnown RBP13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 LRRC4CQ9HCJ2 640 aa13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 SAE1Q9UBE0 346 aaPredicted RBP13.13□□□□□ -0.31
NSMCE1-208ENST00000565070 GREB1Q4ZG55 1949 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 ZNF487B1APH4 448 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 HHLA1C9JL84 531 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 SOX1O00570 391 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 NDC80O14777 642 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 LRG1P02750 347 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 C8AP07357 584 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 HNRNPA1P09651 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 CSH1P0DML2 217 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 CSH2P0DML3 217 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 LCP1P13796 627 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 IL4RP24394 825 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 ACTN2P35609 894 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 TKTL1P51854 596 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 TFDP2Q14188 446 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 GRIN2CQ14957 1233 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 TAF12Q16514 161 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 PPM1LQ5SGD2 360 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 CEP128Q6ZU80 1094 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 DENND5BQ6ZUT9 1274 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 ADGRD2Q7Z7M1 963 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 RBM23Q86U06 439 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 CCDC25Q86WR0 208 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 RFX6Q8HWS3 928 aa13.12□□□□□ -0.31
NSMCE1-208ENST00000565070 CASP10Q92851 521 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms