RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 C10orf76Q5T2E6 689 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 ADGRF1Q5T601 910 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 HEATR6Q6AI08 1181 aaKnown RBP10.34□□□□□ -0.75
CDH1-206ENST00000564676 OLFML1Q6UWY5 402 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 TRIM72Q6ZMU5 477 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 SFTPA1Q8IWL2 248 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 CCDC33Q8N5R6 958 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 EFCAB3Q8N7B9 438 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 TERB1Q8NA31 727 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 USP33Q8TEY7 942 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 RNF34Q969K3 372 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 TMA16Q96EY4 203 aaKnown RBP10.34□□□□□ -0.75
CDH1-206ENST00000564676 FCRL2Q96LA5 508 aaPredicted RBP10.34□□□□□ -0.75
CDH1-206ENST00000564676 SLC2A13Q96QE2 648 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 DDX50Q9BQ39 737 aaKnown RBP10.34□□□□□ -0.75
CDH1-206ENST00000564676 FAM126AQ9BYI3 521 aaPredicted RBP10.34□□□□□ -0.75
CDH1-206ENST00000564676 TSPY26PQ9H489 355 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 C2orf42Q9NWW7 574 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 COX16Q9P0S2 106 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 SLC12A6Q9UHW9 1150 aa10.34□□□□□ -0.75
CDH1-206ENST00000564676 GOLGA6L7A0A1B0GV03 622 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 ANTXRLA6NF34 631 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 GOLGA8SH3BPF8 625 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 K7ESF4 209 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 IRAK2O43187 625 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 DAB1O75553 588 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 PAPSS2O95340 614 aaPredicted RBP10.33□□□□□ -0.76
CDH1-206ENST00000564676 MOCS2O96007 188 aaPredicted RBP10.33□□□□□ -0.76
CDH1-206ENST00000564676 PENKP01210 267 aaPredicted RBP10.33□□□□□ -0.76
CDH1-206ENST00000564676 CYP1A1P04798 512 aaPredicted RBP10.33□□□□□ -0.76
CDH1-206ENST00000564676 NOS2P35228 1153 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 GABRB2P47870 512 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 FNTBP49356 437 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 PITX1P78337 314 aaPredicted RBP10.33□□□□□ -0.76
CDH1-206ENST00000564676 DMC1Q14565 340 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 MPPE1Q53F39 396 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 C2CD6Q53TS8 623 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 ZC3H12AQ5D1E8 599 aaKnown RBP10.33□□□□□ -0.76
CDH1-206ENST00000564676 FAM102AQ5T9C2 384 aaPredicted RBP10.33□□□□□ -0.76
CDH1-206ENST00000564676 EMC10Q5UCC4 262 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 FYB2Q5VWT5 728 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 MMS22LQ6ZRQ5 1243 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 SYT13Q7L8C5 426 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 SLC26A9Q7LBE3 791 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 ALYREFQ86V81 257 aaKnown RBP10.33□□□□□ -0.76
CDH1-206ENST00000564676 FAM217AQ8IXS0 508 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 PHTF2Q8N3S3 785 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 ZNF397Q8NF99 534 aaPredicted RBP10.33□□□□□ -0.76
CDH1-206ENST00000564676 NKD2Q969F2 451 aaPredicted RBP10.33□□□□□ -0.76
CDH1-206ENST00000564676 AZIN2Q96A70 460 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 SLC39A13Q96H72 371 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 AGPAT1Q99943 283 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 POLR3BQ9NW08 1133 aaPredicted RBP10.33□□□□□ -0.76
CDH1-206ENST00000564676 DDIT4Q9NX09 232 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.33□□□□□ -0.76
CDH1-206ENST00000564676 STOML2Q9UJZ1 356 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 MYO6Q9UM54 1294 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 PCDHGA2Q9Y5H1 932 aa10.33□□□□□ -0.76
CDH1-206ENST00000564676 WDFY4Q6ZS81 3184 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 TYW5A2RUC4 315 aaKnown RBP10.32□□□□□ -0.76
CDH1-206ENST00000564676 M0QYT0 321 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 TBL1XO60907 577 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 KLF8O95600 359 aaPredicted RBP10.32□□□□□ -0.76
CDH1-206ENST00000564676 IGLV3-25P01717 112 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 CISD3P0C7P0 127 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 SLC2A3P11169 496 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 TDGF1P13385 188 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 TNFAIP3P21580 790 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 SCNN1AP37088 669 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 MATKP42679 507 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 NSFP46459 744 aaKnown RBP10.32□□□□□ -0.76
CDH1-206ENST00000564676 MRE11P49959 708 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 DMWDQ09019 674 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 NME3Q13232 169 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 ASIC2Q16515 512 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 HSF5Q4G112 596 aaPredicted RBP10.32□□□□□ -0.76
CDH1-206ENST00000564676 EOGTQ5NDL2 527 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 PIK3R6Q5UE93 754 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 SFMBT2Q5VUG0 894 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 RFWD3Q6PCD5 774 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 LRSAM1Q6UWE0 723 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 TRMT11Q7Z4G4 463 aaKnown RBP10.32□□□□□ -0.76
CDH1-206ENST00000564676 PHLDB2Q86SQ0 1253 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 XYLT1Q86Y38 959 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 ALLCQ8N6M5 410 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 ZNF513Q8N8E2 541 aaPredicted RBP10.32□□□□□ -0.76
CDH1-206ENST00000564676 ATP6V0D2Q8N8Y2 350 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 TXNDC5Q8NBS9 432 aaKnown RBP10.32□□□□□ -0.76
CDH1-206ENST00000564676 SLC30A5Q8TAD4 765 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 KCNV2Q8TDN2 545 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 BAP1Q92560 729 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 NELL1Q92832 810 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 P2RY11Q96G91 374 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 HHIPQ96QV1 700 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 PCDHB18PQ96TA0 734 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 C11orf70Q9BRQ4 267 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 NUP58Q9BVL2 599 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 SEMA4AQ9H3S1 761 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 ZDHHC4Q9NPG8 344 aa10.32□□□□□ -0.76
CDH1-206ENST00000564676 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 235.2 ms