RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ST6GALNAC4Q9H4F1 302 aa14.47□□□□□ -0.09
GTF3C1-203ENST00000562609 CNTN3Q9P232 1028 aa14.47□□□□□ -0.09
GTF3C1-203ENST00000562609 PPP2R3BQ9Y5P8 575 aa14.47□□□□□ -0.09
GTF3C1-203ENST00000562609 AOC1P19801 751 aa14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 CDKL1Q00532 357 aa14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 RARS2Q5T160 578 aaKnown RBP14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 C12orf56Q8IXR9 622 aa14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 DCAKDQ8WVC6 231 aa14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 BORCS5Q969J3 196 aa14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 APOPT1Q96IL0 206 aa14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 PLEKHA8Q96JA3 519 aa14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 CDHR1Q96JP9 859 aa14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 LRGUKQ96M69 825 aa14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 ZNF512Q96ME7 567 aaPredicted RBP14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 RANBP9Q96S59 729 aa14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 CGREF1Q99674 301 aa14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 PDLIM7Q9NR12 457 aa14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 C6orf203Q9P0P8 240 aaPredicted RBP14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 EXOC7Q9UPT5 735 aa14.46□□□□□ -0.09
GTF3C1-203ENST00000562609 CYP2C9P11712 490 aa14.46□□□□□ -0.1
GTF3C1-203ENST00000562609 GLRA2P23416 452 aa14.46□□□□□ -0.1
GTF3C1-203ENST00000562609 COPAP53621 1224 aa14.46□□□□□ -0.1
GTF3C1-203ENST00000562609 C21orf59P57076 290 aa14.46□□□□□ -0.1
GTF3C1-203ENST00000562609 IGBP1P78318 339 aa14.46□□□□□ -0.1
GTF3C1-203ENST00000562609 MYBPC2Q14324 1141 aa14.46□□□□□ -0.1
GTF3C1-203ENST00000562609 DEFB107AQ8IZN7 70 aa14.46□□□□□ -0.1
GTF3C1-203ENST00000562609 RDM1Q8NG50 284 aa14.46□□□□□ -0.1
GTF3C1-203ENST00000562609 HSPH1Q92598 858 aa14.46□□□□□ -0.1
GTF3C1-203ENST00000562609 PADI4Q9UM07 663 aa14.46□□□□□ -0.1
GTF3C1-203ENST00000562609 PSMD13Q9UNM6 376 aa14.46□□□□□ -0.1
GTF3C1-203ENST00000562609 CSDE1O75534 798 aaKnown RBP14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 YBX3P16989 372 aaKnown RBP eCLIP14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 YWHAGP61981 247 aaKnown RBP eCLIP14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 CAMK2BQ13554 666 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 XKR3Q5GH77 459 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 ZBTB41Q5SVQ8 909 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 SCARA3Q6AZY7 606 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 SV2AQ7L0J3 742 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 ACTRT2Q8TDY3 377 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 UPF1Q92900 1129 aaKnown RBP eCLIP14.45□□□□□ -0.12e-41■■■■■ 42.1
GTF3C1-203ENST00000562609 C7orf26Q96N11 449 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 NTPCRQ9BSD7 190 aaKnown RBP14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 NUF2Q9BZD4 464 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 IGSF9Q9P2J2 1179 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 NOCTQ9UK39 431 aaKnown RBP14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 BRCA2P51587 3418 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 SBF1O95248 1867 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 PTPRFP10586 1907 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 KLF11O14901 512 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 EDN1P05305 212 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 HMOX2P30519 316 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 GJC1P36383 396 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 CES4AQ5XG92 561 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 KRT39Q6A163 491 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 NANOGP8Q6NSW7 305 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 C16orf87Q6PH81 154 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 CPNE9Q8IYJ1 553 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 MCPH1Q8NEM0 835 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 CHST13Q8NET6 341 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 GRIN3AQ8TCU5 1115 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 PCYT2Q99447 389 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 DHRS4Q9BTZ2 278 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 EBF1Q9UH73 591 aa14.45□□□□□ -0.1
GTF3C1-203ENST00000562609 NFASCO94856 1347 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 CCDC162PA2VCL2 907 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 CNOT3O75175 753 aaKnown RBP14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 ARIH2O95376 493 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 NELFEP18615 380 aaKnown RBP14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 RFX1P22670 979 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 LIG4P49917 911 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 ARPC4P59998 168 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 CREB5Q02930 508 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 GAD2Q05329 585 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 MORF4L2Q15014 288 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 KLHL38Q2WGJ6 581 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 ZNF829Q3KNS6 432 aaPredicted RBP14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 C9orf131Q5VYM1 1079 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 NIPAL1Q6NVV3 410 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 HAPLN2Q9GZV7 340 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 ACSS3Q9H6R3 686 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 ATAD3AQ9NVI7 634 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 DNPEPQ9ULA0 475 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 NOX1Q9Y5S8 564 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 SOBPA7XYQ1 873 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 ALDH3B2P48448 385 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 NLRP11P59045 1033 aaKnown RBP14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 FMO1Q01740 532 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 PEX6Q13608 980 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 HIF1AQ16665 826 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 CRLF3Q8IUI8 442 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 CCDC33Q8N5R6 958 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 E2F7Q96AV8 911 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 TRIM56Q9BRZ2 755 aaKnown RBP14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 TARS2Q9BW92 718 aaKnown RBP14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 SPON1Q9HCB6 807 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 MCM3APO60318 1980 aa14.44□□□□□ -0.1
GTF3C1-203ENST00000562609 WDR90Q96KV7 1748 aa14.43□□□□□ -0.1
GTF3C1-203ENST00000562609 SDR42E2A6NKP2 422 aa14.43□□□□□ -0.1
GTF3C1-203ENST00000562609 FARP2O94887 1054 aaPredicted RBP14.43□□□□□ -0.1
GTF3C1-203ENST00000562609 SSTR3P32745 418 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms