RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 MBD1Q9UIS9 605 aaPredicted RBP26.43■■□□□ 1.82
NME3-202ENST00000561637 STRIP2Q9ULQ0 834 aa26.43■■□□□ 1.82
NME3-202ENST00000561637 RAD54BQ9Y620 910 aa26.43■■□□□ 1.82
NME3-202ENST00000561637 SPAARA0A1B0GVQ0 90 aa26.42■■□□□ 1.82
NME3-202ENST00000561637 HOXB2P14652 356 aa26.42■■□□□ 1.82
NME3-202ENST00000561637 CETN1Q12798 172 aa26.42■■□□□ 1.82
NME3-202ENST00000561637 DENND1BQ6P3S1 775 aa26.42■■□□□ 1.82
NME3-202ENST00000561637 SLC6A17Q9H1V8 727 aa26.42■■□□□ 1.82
NME3-202ENST00000561637 CD248Q9HCU0 757 aa26.42■■□□□ 1.82
NME3-202ENST00000561637 BCCIPQ9P287 314 aaKnown RBP eCLIP26.42■■□□□ 1.82
NME3-202ENST00000561637 FBXO10Q9UK96 956 aa26.42■■□□□ 1.82
NME3-202ENST00000561637 STARD13Q9Y3M8 1113 aa26.42■■□□□ 1.82
NME3-202ENST00000561637 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 WASH3PC4AMC7 463 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 TSPAN3O60637 253 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 KRT5P13647 590 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 GABRG2P18507 467 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 P2RY2P41231 377 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 PTGER3P43115 390 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 TRIP4Q15650 581 aaPredicted RBP26.41■■□□□ 1.82
NME3-202ENST00000561637 GEN1Q17RS7 908 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 TMEFF1Q8IYR6 380 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 DCLK3Q9C098 648 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 MIS12Q9H081 205 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 CLSTN2Q9H4D0 955 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 POLMQ9NP87 494 aaPredicted RBP26.41■■□□□ 1.82
NME3-202ENST00000561637 UBE2TQ9NPD8 197 aaPredicted RBP26.41■■□□□ 1.82
NME3-202ENST00000561637 CNGB3Q9NQW8 809 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 AJAP1Q9UKB5 411 aaPredicted RBP26.41■■□□□ 1.82
NME3-202ENST00000561637 MSRB2Q9Y3D2 182 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 LAMA5O15230 3695 aa26.41■■□□□ 1.82
NME3-202ENST00000561637 TAF4O00268 1085 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 ALDH1A2O94788 518 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 ENGP17813 658 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 SLC9A1P19634 815 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 NTSR1P30989 418 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 MFAP3P55082 362 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 LMAN2Q12907 356 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 MAP7D1Q3KQU3 841 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 CHPFQ8IZ52 775 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 PGBD3Q8N328 593 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 PLD4Q96BZ4 506 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 NUSAP1Q9BXS6 441 aaKnown RBP26.4■■□□□ 1.82
NME3-202ENST00000561637 CD93Q9NPY3 652 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 FSCN3Q9NQT6 498 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 CNTN6Q9UQ52 1028 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 ZNF510Q9Y2H8 683 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 ITPR1Q14643 2758 aa26.4■■□□□ 1.82
NME3-202ENST00000561637 SGSHP51688 502 aa26.39■■□□□ 1.82
NME3-202ENST00000561637 PIP4P1Q86T03 277 aa26.39■■□□□ 1.82
NME3-202ENST00000561637 FAM217AQ8IXS0 508 aa26.39■■□□□ 1.82
NME3-202ENST00000561637 RNF139Q8WU17 664 aa26.39■■□□□ 1.82
NME3-202ENST00000561637 SLC32A1Q9H598 525 aa26.39■■□□□ 1.82
NME3-202ENST00000561637 CALCOCO1Q9P1Z2 691 aa26.39■■□□□ 1.82
NME3-202ENST00000561637 CYTH4Q9UIA0 394 aa26.39■■□□□ 1.82
NME3-202ENST00000561637 ATXN2Q99700 1313 aaKnown RBP26.39■■□□□ 1.81
NME3-202ENST00000561637 BECN2A8MW95 431 aa26.38■■□□□ 1.81
NME3-202ENST00000561637 SIM1P81133 766 aaPredicted RBP26.38■■□□□ 1.81
NME3-202ENST00000561637 DPCR1Q3MIW9 517 aa26.38■■□□□ 1.81
NME3-202ENST00000561637 PREPLQ4J6C6 727 aaPredicted RBP26.38■■□□□ 1.81
NME3-202ENST00000561637 TRIM65Q6PJ69 517 aa26.38■■□□□ 1.81
NME3-202ENST00000561637 LPCAT2Q7L5N7 544 aa26.38■■□□□ 1.81
NME3-202ENST00000561637 SCML4Q8N228 414 aa26.38■■□□□ 1.81
NME3-202ENST00000561637 KCNV2Q8TDN2 545 aa26.38■■□□□ 1.81
NME3-202ENST00000561637 SORCS1Q8WY21 1168 aa26.38■■□□□ 1.81
NME3-202ENST00000561637 PIWIL1Q96J94 861 aaKnown RBP26.38■■□□□ 1.81
NME3-202ENST00000561637 OLA1Q9NTK5 396 aaKnown RBP26.38■■□□□ 1.81
NME3-202ENST00000561637 LOC400499M0QZD8 3231 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 FYNP06241 537 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 NDUFV2P19404 249 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 CHKAP35790 457 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 GPD2P43304 727 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 FAM193AP78312 1265 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 SEMA3BQ13214 749 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 HSP90AA4PQ58FG1 418 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 MSANTD2Q6P1R3 559 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 TRMT11Q7Z4G4 463 aaKnown RBP26.37■■□□□ 1.81
NME3-202ENST00000561637 SYT12Q8IV01 421 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 CPXM2Q8N436 756 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 DEFB119Q8N690 84 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 IPO4Q8TEX9 1081 aaKnown RBP26.37■■□□□ 1.81
NME3-202ENST00000561637 GABRG3Q99928 467 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 ABCC13Q9NSE7 274 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 TJP2Q9UDY2 1190 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 SLC27A6Q9Y2P4 619 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 HBS1LQ9Y450 684 aaKnown RBP26.37■■□□□ 1.81
NME3-202ENST00000561637 PCDH15Q96QU1 1955 aa26.37■■□□□ 1.81
NME3-202ENST00000561637 GOLGA6L7A0A1B0GV03 622 aa26.36■■□□□ 1.81
NME3-202ENST00000561637 GFRA2O00451 464 aa26.36■■□□□ 1.81
NME3-202ENST00000561637 MAP3K13O43283 966 aa26.36■■□□□ 1.81
NME3-202ENST00000561637 LETM1O95202 739 aaPredicted RBP26.36■■□□□ 1.81
NME3-202ENST00000561637 FGFR1OPO95684 399 aaKnown RBP26.36■■□□□ 1.81
NME3-202ENST00000561637 LTFP02788 710 aa26.36■■□□□ 1.81
NME3-202ENST00000561637 ARHGAP44Q17R89 818 aa26.36■■□□□ 1.81
NME3-202ENST00000561637 TMEM215Q68D42 235 aa26.36■■□□□ 1.81
NME3-202ENST00000561637 SLC23A3Q6PIS1 610 aa26.36■■□□□ 1.81
NME3-202ENST00000561637 NUDT18Q6ZVK8 323 aa26.36■■□□□ 1.81
NME3-202ENST00000561637 DDI1Q8WTU0 396 aa26.36■■□□□ 1.81
NME3-202ENST00000561637 CAPNS1P04632 268 aa26.35■■□□□ 1.81
NME3-202ENST00000561637 HOXD9P28356 352 aaPredicted RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms