RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 RBM41Q96IZ5 413 aaKnown RBP7.72□□□□□ -1.17
IDH3A-220ENST00000560667 RPGRIP1Q96KN7 1286 aa7.72□□□□□ -1.17
IDH3A-220ENST00000560667 SPATA17Q96L03 361 aa7.72□□□□□ -1.17
IDH3A-220ENST00000560667 PBX4Q9BYU1 374 aa7.72□□□□□ -1.17
IDH3A-220ENST00000560667 RXFP1Q9HBX9 757 aa7.72□□□□□ -1.17
IDH3A-220ENST00000560667 LRRC4CQ9HCJ2 640 aa7.72□□□□□ -1.17
IDH3A-220ENST00000560667 GDF3Q9NR23 364 aa7.72□□□□□ -1.17
IDH3A-220ENST00000560667 MPP6Q9NZW5 540 aa7.72□□□□□ -1.17
IDH3A-220ENST00000560667 OR12D3Q9UGF7 316 aa7.72□□□□□ -1.17
IDH3A-220ENST00000560667 YIPF1Q9Y548 306 aa7.72□□□□□ -1.17
IDH3A-220ENST00000560667 KCNU1A8MYU2 1149 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 F5H423 210 aaPredicted RBP7.71□□□□□ -1.18
IDH3A-220ENST00000560667 CCDC188H7C350 402 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 IRAK2O43187 625 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 TJP3O95049 919 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 KLKB1P03952 638 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 ZDHHC11BP0C7U3 371 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 NTHL1P78549 312 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 BYSLQ13895 437 aaKnown RBP7.71□□□□□ -1.18
IDH3A-220ENST00000560667 OASLQ15646 514 aaKnown RBP7.71□□□□□ -1.18
IDH3A-220ENST00000560667 CCNG2Q16589 344 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 C10orf120Q5SQS8 335 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 DUPD1Q68J44 220 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 TXNDC8Q6A555 127 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 BBS12Q6ZW61 710 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 GAREM2Q75VX8 874 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 NPWQ8N729 165 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 C12orf76Q8N812 135 aaPredicted RBP7.71□□□□□ -1.18
IDH3A-220ENST00000560667 SLC35B2Q8TB61 432 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 PGAP3Q96FM1 320 aaPredicted RBP7.71□□□□□ -1.18
IDH3A-220ENST00000560667 FCRL2Q96LA5 508 aaPredicted RBP7.71□□□□□ -1.18
IDH3A-220ENST00000560667 ZNF512Q96ME7 567 aaPredicted RBP7.71□□□□□ -1.18
IDH3A-220ENST00000560667 SLC9A7Q96T83 725 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 LGMNQ99538 433 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 CEP41Q9BYV8 373 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 SMG9Q9H0W8 520 aaKnown RBP7.71□□□□□ -1.18
IDH3A-220ENST00000560667 ENTPD7Q9NQZ7 604 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 ARHGEF4Q9NR80 690 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 GRHL1Q9NZI5 618 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 PCYOX1Q9UHG3 505 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 STAP1Q9ULZ2 295 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 ZNF148Q9UQR1 794 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 INSL5Q9Y5Q6 135 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 HCFC2Q9Y5Z7 792 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 DNAH14Q0VDD8 3507 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 PRRC2BQ5JSZ5 2229 aaKnown RBP7.71□□□□□ -1.18
IDH3A-220ENST00000560667 GBF1Q92538 1859 aa7.71□□□□□ -1.18
IDH3A-220ENST00000560667 CCL16O15467 120 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 COCHO43405 550 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 TLR5O60602 858 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 CNTN5O94779 1100 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 LRIG2O94898 1065 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 ERCC2P18074 760 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 CHRNA3P32297 505 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 TUFMP49411 452 aaKnown RBP7.7□□□□□ -1.18
IDH3A-220ENST00000560667 CYP4F8P98187 520 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 SEMA3BQ13214 749 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 PIK3R6Q5UE93 754 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 NCBP2-AS2Q69YL0 99 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 SLC9A4Q6AI14 798 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 WDR93Q6P2C0 686 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 ZDHHC24Q6UX98 284 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 ARHGAP36Q6ZRI8 547 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 FAM43BQ6ZT52 329 aaPredicted RBP7.7□□□□□ -1.18
IDH3A-220ENST00000560667 CIR1Q86X95 450 aaPredicted RBP7.7□□□□□ -1.18
IDH3A-220ENST00000560667 TCEAL8Q8IYN2 117 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 CFAP52Q8N1V2 620 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 SCML4Q8N228 414 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 FAM71DQ8N9W8 422 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 RNF139Q8WU17 664 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 TEKT4Q8WW24 435 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 ARNTL2Q8WYA1 636 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 FAF2Q96CS3 445 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 TCEAL4Q96EI5 215 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 SLC39A13Q96H72 371 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 CELF6Q96J87 481 aaKnown RBP7.7□□□□□ -1.18
IDH3A-220ENST00000560667 CCDC114Q96M63 670 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 ERP44Q9BS26 406 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 MAK16Q9BXY0 300 aaKnown RBP7.7□□□□□ -1.18
IDH3A-220ENST00000560667 LRRC3Q9BY71 257 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 NKX2-4Q9H2Z4 354 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 FBXO44Q9H4M3 255 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 IL21Q9HBE4 155 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 USP29Q9HBJ7 922 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 AAASQ9NRG9 546 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 DNAJC17Q9NVM6 304 aaKnown RBP7.7□□□□□ -1.18
IDH3A-220ENST00000560667 SMPD4Q9NXE4 827 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 NEU3Q9UQ49 428 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 HS3ST4Q9Y661 456 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 PATJQ8NI35 1801 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 TCRBV7S3A2A0A539 114 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 SLC12A8A0AV02 714 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 IFNB1P01574 187 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 F11P03951 625 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 RBP3P10745 1247 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 RBL1P28749 1068 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 PPM1AP35813 382 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 ALDH1A3P47895 512 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 CLCN4P51793 760 aa7.7□□□□□ -1.18
IDH3A-220ENST00000560667 PLTPP55058 493 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms