RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ALOX5P09917 674 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 MTAPQ13126 283 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 IER5Q5VY09 327 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 RHOBTB2Q9BYZ6 727 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 TRIM2Q9C040 744 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 CYP4F12Q9HCS2 524 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 TBC1D24Q9ULP9 559 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 GALCP54803 685 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 Q4G0T1 1027 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 LRRC34Q8IZ02 419 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 YME1L1Q96TA2 773 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 NAT9Q9BTE0 207 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 SRP68Q9UHB9 627 aaKnown RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 CLEC4AQ9UMR7 237 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 PLCL2Q9UPR0 1127 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 F5H5T6 163 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 GLP2RO95838 553 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 CDH3P22223 829 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 PRKAA1Q13131 559 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 STARD3Q14849 445 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 TNFAIP8L3Q5GJ75 292 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 CCDC54Q8NEL0 328 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 AHCYL2Q96HN2 611 aaKnown RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 ACOX2Q99424 681 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 WDR12Q9GZL7 423 aaKnown RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 SSU72P8A0A1W2PR75 194 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 ARHGEF33A8MVX0 844 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 GPR15P49685 360 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 SNRPFP62306 86 aaKnown RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 TXNRD1Q16881 649 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 STRA8Q7Z7C7 330 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 RNF149Q8NC42 400 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 EXO5Q9H790 373 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 A1CFQ9NQ94 594 aaKnown RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 ABCB10Q9NRK6 738 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 UBP1Q9NZI7 540 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 SSR3Q9UNL2 185 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 KBTBD13C9JR72 458 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 GAS2O43903 313 aaKnown RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 CASP5P51878 434 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 FASTKQ14296 549 aaKnown RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 TCHHL1Q5QJ38 904 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 TMED8Q6PL24 325 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 DENND5BQ6ZUT9 1274 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 RP9Q8TA86 221 aaKnown RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 SYTL5Q8TDW5 730 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 LRRC40Q9H9A6 602 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 FARP2O94887 1054 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 KCNH1O95259 989 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 SERPINA3P01011 423 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 CAPGP40121 348 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 AP3S2P59780 193 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 PRR5LQ6MZQ0 368 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 MTDHQ86UE4 582 aaKnown RBP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 STK32CQ86UX6 486 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 AKAP1Q92667 903 aaKnown RBP eCLIP14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 OSBPL11Q9BXB4 747 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 SPEF1Q9Y4P9 236 aa14.17□□□□□ -0.14
CSPG4P12-202ENST00000559989 CST8O60676 142 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 RPL9P32969 192 aaKnown RBP14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 BRINP3Q76B58 766 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 RNF145Q96MT1 663 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 CST11Q9H112 138 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 EFR3BQ9Y2G0 817 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 USP17L5A8MUK1 530 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 LOC110117498-PIK3R3F6TDL0 507 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 PRLP01236 227 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 CDC42P60953 191 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 KCNA10Q16322 511 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 DNMBPQ6XZF7 1577 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 PIK3R3Q92569 461 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 ITCHQ96J02 903 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 RBM12Q9NTZ6 932 aaKnown RBP14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 RRN3Q9NYV6 651 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 DHRS7Q9Y394 339 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 PLEKHG1Q9ULL1 1385 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 ULK1O75385 1050 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 FNDC5Q8NAU1 212 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 TRMT13Q9NUP7 481 aaKnown RBP14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 TMEM216Q9P0N5 145 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 MRPS7Q9Y2R9 242 aaKnown RBP14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 TIPRLO75663 272 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 EYA4O95677 639 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 SERPINA1P01009 418 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 GH2P01242 217 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 UGT1A5P35504 534 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 FMO5P49326 533 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 PREPLQ4J6C6 727 aaPredicted RBP14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 BROXQ5VW32 411 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 ANKRD6Q9Y2G4 727 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 GATBO75879 557 aaKnown RBP14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 ITGA4P13612 1032 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 ITGALP20701 1170 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 PSME3P61289 254 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 KCNMA1Q12791 1236 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 MYBPC3Q14896 1274 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 APOBEC3FQ8IUX4 373 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms