RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 PAF1Q8N7H5 531 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 PIGKQ92643 395 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 GJA10Q969M2 543 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 LRRC46Q96FV0 321 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 WDR24Q96S15 920 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 APOL5Q9BWW9 433 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 RXFP3Q9NSD7 469 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 ZNF69Q9UC07 566 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 SWAP70Q9UH65 585 aa4.32□□□□□ -1.72
SPG11-218ENST00000559754 HEMK1Q9Y5R4 338 aaPredicted RBP4.32□□□□□ -1.72
SPG11-218ENST00000559754 C2CD4BA6NLJ0 364 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 H3BNX3 289 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 APAF1O14727 1248 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 TKTP29401 623 aaKnown RBP4.31□□□□□ -1.72
SPG11-218ENST00000559754 IRX6P78412 446 aaPredicted RBP4.31□□□□□ -1.72
SPG11-218ENST00000559754 B4GALNT1Q00973 533 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 FOXD4Q12950 439 aaPredicted RBP4.31□□□□□ -1.72
SPG11-218ENST00000559754 FHL3Q13643 280 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 MAPRE1Q15691 268 aaKnown RBP4.31□□□□□ -1.72
SPG11-218ENST00000559754 ABLIM2Q6H8Q1 611 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 CRTC1Q6UUV9 634 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 FAM57BQ71RH2 274 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 OVCA2Q8WZ82 227 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 FCRL5Q96RD9 977 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 HERPUD2Q9BSE4 406 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 TUBB6Q9BUF5 446 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 COLEC11Q9BWP8 271 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 EIF2AQ9BY44 585 aaKnown RBP4.31□□□□□ -1.72
SPG11-218ENST00000559754 KRTAP1-5Q9BYS1 174 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 ABHD10Q9NUJ1 306 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 TMEM45AQ9NWC5 275 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 LAS1LQ9Y4W2 734 aaKnown RBP4.31□□□□□ -1.72
SPG11-218ENST00000559754 SQORQ9Y6N5 450 aa4.31□□□□□ -1.72
SPG11-218ENST00000559754 POM121BA6NF01 834 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 CD8B2A6NJW9 211 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 RRHO14718 337 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 KCNQ3O43525 872 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 MYL3P08590 195 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 ARP10275 920 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 PSG1P11464 419 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 TFEBP19484 476 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 DRD1P21728 446 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 RPS6KB1P23443 525 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 IGHMBP2P38935 993 aaKnown RBP4.3□□□□□ -1.72
SPG11-218ENST00000559754 PBX1P40424 430 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 ZNF543Q08ER8 600 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 MTX1Q13505 466 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 LEXMQ3ZCV2 418 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 GLE1Q53GS7 698 aaKnown RBP4.3□□□□□ -1.72
SPG11-218ENST00000559754 RBM44Q6ZP01 1051 aaKnown RBP4.3□□□□□ -1.72
SPG11-218ENST00000559754 COLCA1Q6ZS62 124 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 MMP21Q8N119 569 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 CLASRPQ8N2M8 674 aaKnown RBP4.3□□□□□ -1.72
SPG11-218ENST00000559754 AKAP1Q92667 903 aaKnown RBP eCLIP4.3□□□□□ -1.72
SPG11-218ENST00000559754 TRMT61AQ96FX7 289 aaKnown RBP4.3□□□□□ -1.72
SPG11-218ENST00000559754 PRR11Q96HE9 360 aaPredicted RBP4.3□□□□□ -1.72
SPG11-218ENST00000559754 TNIP3Q96KP6 325 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 SNX27Q96L92 541 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 TM2D2Q9BX73 214 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 NLRC4Q9NPP4 1024 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 PLCB1Q9NQ66 1216 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 FBXO9Q9UK97 447 aaPredicted RBP4.3□□□□□ -1.72
SPG11-218ENST00000559754 PHTF1Q9UMS5 762 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 VPS4AQ9UN37 437 aa4.3□□□□□ -1.72
SPG11-218ENST00000559754 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.3□□□□□ -1.72
SPG11-218ENST00000559754 CACNA1IQ9P0X4 2223 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 A0A087WZ62 844 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 F8W810 466 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 CBFA2T3O75081 653 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 FGFR2P21802 821 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 BDNFP23560 247 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 SERPINB3P29508 390 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 MAN1A1P33908 653 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 HOXD12P35452 270 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 IL6STP40189 918 aaPredicted RBP4.29□□□□□ -1.72
SPG11-218ENST00000559754 PIK3CBP42338 1070 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 VPS41P49754 854 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 LINC00205P59089 165 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 SEMA3BQ13214 749 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 MTA1Q13330 715 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 BFSP2Q13515 415 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.29□□□□□ -1.72
SPG11-218ENST00000559754 WDR78Q5VTH9 848 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 ANO1Q5XXA6 986 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 FAM90A2PQ658T7 463 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 LVRNQ6Q4G3 990 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 CPXCR1Q8N123 301 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 CCDC33Q8N5R6 958 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 ANKRD42Q8N9B4 389 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 ZNF548Q8NEK5 533 aaPredicted RBP4.29□□□□□ -1.72
SPG11-218ENST00000559754 OR52L2PQ8NGH6 319 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 EIF3CQ99613 913 aaKnown RBP4.29□□□□□ -1.72
SPG11-218ENST00000559754 NUDT22Q9BRQ3 303 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 AGO4Q9HCK5 861 aaKnown RBP4.29□□□□□ -1.72
SPG11-218ENST00000559754 PAPOLBQ9NRJ5 636 aaKnown RBP4.29□□□□□ -1.72
SPG11-218ENST00000559754 MYO1AQ9UBC5 1043 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 LZTS1Q9Y250 596 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 PCDHB2Q9Y5E7 798 aa4.29□□□□□ -1.72
SPG11-218ENST00000559754 SPATA31A5Q5VU36 1347 aa4.28□□□□□ -1.72
SPG11-218ENST00000559754 SPATA31A7Q8IWB4 1347 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms