RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 NDST1P52848 882 aa11.31□□□□□ -0.6
TRAF3-207ENST00000559734 CEBPZQ03701 1054 aaKnown RBP11.31□□□□□ -0.6
TRAF3-207ENST00000559734 TLE3Q04726 772 aa11.31□□□□□ -0.6
TRAF3-207ENST00000559734 RTP5Q14D33 572 aa11.31□□□□□ -0.6
TRAF3-207ENST00000559734 TTC31Q49AM3 519 aaPredicted RBP11.31□□□□□ -0.6
TRAF3-207ENST00000559734 TMEM215Q68D42 235 aa11.31□□□□□ -0.6
TRAF3-207ENST00000559734 BRAPQ7Z569 592 aa11.31□□□□□ -0.6
TRAF3-207ENST00000559734 PDILTQ8N807 584 aa11.31□□□□□ -0.6
TRAF3-207ENST00000559734 FAM181AQ8N9Y4 354 aa11.31□□□□□ -0.6
TRAF3-207ENST00000559734 ELF4Q99607 663 aaPredicted RBP11.31□□□□□ -0.6
TRAF3-207ENST00000559734 NRSN2Q9GZP1 204 aa11.31□□□□□ -0.6
TRAF3-207ENST00000559734 CLMPQ9H6B4 373 aa11.31□□□□□ -0.6
TRAF3-207ENST00000559734 AASDHPPTQ9NRN7 309 aa11.31□□□□□ -0.6
TRAF3-207ENST00000559734 SMC3Q9UQE7 1217 aa11.31□□□□□ -0.6
TRAF3-207ENST00000559734 VPS37CA5D8V6 355 aaPredicted RBP11.3□□□□□ -0.6
TRAF3-207ENST00000559734 CDK4P11802 303 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 GLDCP23378 1020 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 HOXD13P35453 343 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 RPS14P62263 151 aaKnown RBP11.3□□□□□ -0.6
TRAF3-207ENST00000559734 RACK1P63244 317 aaKnown RBP11.3□□□□□ -0.6
TRAF3-207ENST00000559734 KCNH2Q12809 1159 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 CAMK2GQ13555 558 aaPredicted RBP11.3□□□□□ -0.6
TRAF3-207ENST00000559734 NCOA4Q13772 614 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 KIAA0895LQ68EN5 471 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 FBXL19Q6PCT2 694 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 KLHDC10Q6PID8 442 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 CLEC20AQ6ZU45 233 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 CHST9Q7L1S5 443 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 FMNL3Q8IVF7 1028 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 XXYLT1Q8NBI6 393 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 SKA1Q96BD8 255 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 DCLK3Q9C098 648 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 SGK2Q9HBY8 427 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 CSNK1G1Q9HCP0 422 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 AGO1Q9UL18 857 aaKnown RBP11.3□□□□□ -0.6
TRAF3-207ENST00000559734 PLA2G4CQ9UP65 541 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 PCDHA5Q9Y5H7 936 aa11.3□□□□□ -0.6
TRAF3-207ENST00000559734 A0A087X0B3 334 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.29□□□□□ -0.6
TRAF3-207ENST00000559734 SLC12A8A0AV02 714 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 HHLA1C9JL84 531 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 VILLO15195 856 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 EIF3DO15371 548 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRAF3-207ENST00000559734 PAPSS1O43252 624 aaPredicted RBP11.29□□□□□ -0.6
TRAF3-207ENST00000559734 TGFB1I1O43294 461 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 TIMM44O43615 452 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 C1SP09871 688 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 P4HA1P13674 534 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 TRIM21P19474 475 aaKnown RBP11.29□□□□□ -0.6
TRAF3-207ENST00000559734 ASIC1P78348 528 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 COG7P83436 770 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 LY6DQ14210 128 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 TBC1D25Q3MII6 688 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 ARHGAP40Q5TG30 622 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 BROXQ5VW32 411 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 KDM7AQ6ZMT4 941 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 RSRC2Q7L4I2 434 aaKnown RBP11.29□□□□□ -0.6
TRAF3-207ENST00000559734 SCD5Q86SK9 330 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 ERICH1Q86X53 443 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 RBBP8NLQ8NC74 664 aaPredicted RBP11.29□□□□□ -0.6
TRAF3-207ENST00000559734 TMX3Q96JJ7 454 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 ORAI3Q9BRQ5 295 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 GZF1Q9H116 711 aaPredicted RBP11.29□□□□□ -0.6
TRAF3-207ENST00000559734 VRTNQ9H8Y1 702 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 CPNE5Q9HCH3 593 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 PRSS16Q9NQE7 514 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 GDF3Q9NR23 364 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 STRIP2Q9ULQ0 834 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 CLCA2Q9UQC9 943 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 NCKAP1Q9Y2A7 1128 aa11.29□□□□□ -0.6
TRAF3-207ENST00000559734 SRPRBQ9Y5M8 271 aaKnown RBP11.29□□□□□ -0.6
TRAF3-207ENST00000559734 CKAP5Q14008 2032 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 A0A1W2PPC4 97 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 STX6O43752 255 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 EXOC3O60645 756 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 WNT1P04628 370 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 IGHV4-34P06331 123 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 EPHA8P29322 1005 aaPredicted RBP11.28□□□□□ -0.6
TRAF3-207ENST00000559734 PSEN1P49768 467 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 TMPRSS3P57727 454 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 RHDQ02161 417 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 KCNC4Q03721 635 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 NUMA1Q14980 2115 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 SHBQ15464 509 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 BMT2Q1RMZ1 405 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 FAM26FQ5R3K3 315 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 ZNF776Q68DI1 518 aaPredicted RBP11.28□□□□□ -0.6
TRAF3-207ENST00000559734 SPOPLQ6IQ16 392 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 SAP25Q8TEE9 199 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 WFIKKN2Q8TEU8 576 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 CYFIP2Q96F07 1278 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 CDK5RAP1Q96SZ6 601 aaKnown RBP11.28□□□□□ -0.6
TRAF3-207ENST00000559734 SLC2A11Q9BYW1 496 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 SEMA4CQ9C0C4 833 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 TMEM245Q9H330 911 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 MTG2Q9H4K7 406 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 FBRSQ9HAH7 460 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 ABCB8Q9NUT2 735 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 MARCH2Q9P0N8 246 aa11.28□□□□□ -0.6
TRAF3-207ENST00000559734 ZNF462Q96JM2 2506 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms