RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 GPC3P51654 580 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 IRX6P78412 446 aaPredicted RBP6.73□□□□□ -1.33
CLPX-202ENST00000558103 STRN3Q13033 797 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 DUSP8Q13202 625 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 UGCGQ16739 394 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 EFCAB12Q6NXP0 572 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 RASSF3Q86WH2 238 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 TMEM173Q86WV6 379 aaPredicted RBP6.73□□□□□ -1.33
CLPX-202ENST00000558103 LRRC71Q8N4P6 559 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 CCDC12Q8WUD4 166 aaPredicted RBP6.73□□□□□ -1.33
CLPX-202ENST00000558103 CASP10Q92851 521 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 DVL3Q92997 716 aaPredicted RBP6.73□□□□□ -1.33
CLPX-202ENST00000558103 FAM167AQ96KS9 214 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 RIPOR3Q96MK2 946 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 ZNF558Q96NG5 402 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 MAP7D2Q96T17 732 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 KRTAP3-1Q9BYR8 98 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 BRINP2Q9C0B6 783 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 SLC6A15Q9H2J7 730 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 POMKQ9H5K3 350 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 PCDH12Q9NPG4 1184 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 POLR3BQ9NW08 1133 aaPredicted RBP6.73□□□□□ -1.33
CLPX-202ENST00000558103 KCNG1Q9UIX4 513 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 MYH15Q9Y2K3 1946 aa6.73□□□□□ -1.33
CLPX-202ENST00000558103 MIA3Q5JRA6 1907 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 PATJQ8NI35 1801 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 IGKV6-21A0A0C4DH24 114 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 CCDC196A0A1B0GTZ2 297 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.72□□□□□ -1.33
CLPX-202ENST00000558103 C2CD4DB7Z1M9 353 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 PRPF3O43395 683 aaKnown RBP6.72□□□□□ -1.33
CLPX-202ENST00000558103 SLC26A4O43511 780 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 FGFR4P22455 802 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 SP100P23497 879 aaPredicted RBP6.72□□□□□ -1.33
CLPX-202ENST00000558103 TMOD1P28289 359 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 GNA11P29992 359 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 RPS19P39019 145 aaKnown RBP6.72□□□□□ -1.33
CLPX-202ENST00000558103 ID4P47928 161 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 ATP2C1P98194 919 aaPredicted RBP6.72□□□□□ -1.33
CLPX-202ENST00000558103 PRKCEQ02156 737 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 KRT17Q04695 432 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 ITIH3Q06033 890 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 DRP2Q13474 957 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 KRT32Q14532 448 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 SMC1AQ14683 1233 aaKnown RBP6.72□□□□□ -1.33
CLPX-202ENST00000558103 PRR16Q569H4 304 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 B3GNT9Q6UX72 402 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 TRMT1LQ7Z2T5 733 aaKnown RBP6.72□□□□□ -1.33
CLPX-202ENST00000558103 CLEC14AQ86T13 490 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 GPR135Q8IZ08 494 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 FBXL16Q8N461 479 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 MRPL43Q8N983 215 aaKnown RBP6.72□□□□□ -1.33
CLPX-202ENST00000558103 RSPH1Q8WYR4 309 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 GCDHQ92947 438 aaPredicted RBP6.72□□□□□ -1.33
CLPX-202ENST00000558103 PHKBQ93100 1093 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 ZNF668Q96K58 619 aaPredicted RBP6.72□□□□□ -1.33
CLPX-202ENST00000558103 SNX27Q96L92 541 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 NECTIN4Q96NY8 510 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 CEP89Q96ST8 783 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 APOL5Q9BWW9 433 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 RNF26Q9BY78 433 aaPredicted RBP6.72□□□□□ -1.33
CLPX-202ENST00000558103 MRPL9Q9BYD2 267 aaKnown RBP6.72□□□□□ -1.33
CLPX-202ENST00000558103 AGXT2Q9BYV1 514 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 OSBPL6Q9BZF3 934 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 ZBP1Q9H171 429 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 NELFAQ9H3P2 528 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 MS4A5Q9H3V2 200 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 C6orf50Q9HD87 102 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 SPG21Q9NZD8 308 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 TCEAL9Q9UHQ7 104 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 DNAI1Q9UI46 699 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 SORCS3Q9UPU3 1222 aa6.72□□□□□ -1.33
CLPX-202ENST00000558103 WDR87Q6ZQQ6 2873 aa6.71□□□□□ -1.33
CLPX-202ENST00000558103 DOCK6Q96HP0 2047 aa6.71□□□□□ -1.33
CLPX-202ENST00000558103 A0A0A6YYK5 440 aaPredicted RBP6.71□□□□□ -1.34
CLPX-202ENST00000558103 PRSS38A1L453 326 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 NT5C1B-RDH14C9J2C7 533 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 PROB1E7EW31 1015 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 DAPK3O43293 454 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 CSDE1O75534 798 aaKnown RBP6.71□□□□□ -1.34
CLPX-202ENST00000558103 PSMD10O75832 226 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 PCDH8O95206 1070 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 STBD1O95210 358 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 CPA1P15085 419 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 ZNF20P17024 532 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 SFNP31947 248 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 JAK3P52333 1124 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 CES5AQ6NT32 575 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 SKAP1Q86WV1 359 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 UBALD2Q8IYN6 164 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 FUKQ8N0W3 1084 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 TMEM105Q8N8V8 129 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 PLA2G15Q8NCC3 412 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 CCDC148Q8NFR7 591 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 RABGGTAQ92696 567 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 GJA10Q969M2 543 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 SLC7A6OSQ96CW6 309 aaPredicted RBP6.71□□□□□ -1.34
CLPX-202ENST00000558103 HIST1H2AHQ96KK5 128 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 RIT2Q99578 217 aa6.71□□□□□ -1.34
CLPX-202ENST00000558103 HIST1H2AJQ99878 128 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms